RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 TTC24A2A3L6 582 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 A8MU76 341 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 CXorf49A8MYA2 514 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 hCG_2039718K7EN88 272 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 C6P13671 934 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 DRD2P14416 443 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 MSX2P35548 267 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 TNFRSF4P43489 277 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 SPINT3P49223 89 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 STK19P49842 368 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 ARSFP54793 590 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 KLF1Q13351 362 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 SHQ1Q6PI26 577 aaKnown RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 QSOX2Q6ZRP7 698 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 TMEM135Q86UB9 458 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 CAND1Q86VP6 1230 aaKnown RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 CPNE8Q86YQ8 564 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 PNLDC1Q8NA58 520 aaKnown RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 GTPBP3Q969Y2 492 aaKnown RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 DEFB126Q9BYW3 111 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 NKIRAS2Q9NYR9 191 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 DAPL1A0PJW8 107 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 C2orf71A6NGG8 1288 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 TTLL8A6PVC2 850 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 H0YJX3 145 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 GSTM2P28161 218 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 SEPHS1P49903 392 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 SMSP52788 366 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 LRP8Q14114 963 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 NPTX1Q15818 432 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 REEP3Q6NUK4 255 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 AMIGO1Q86WK6 493 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 GPALPP1Q8IXQ4 340 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 Q8N9G6 341 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 POC5Q8NA72 575 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 CDK15Q96Q40 435 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 CHCHD6Q9BRQ6 235 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 UQCC2Q9BRT2 126 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 OR51V1Q9H2C8 321 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 OR51B5Q9H339 312 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 TCF7L1Q9HCS4 588 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 ZNF358Q9NW07 568 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 MKS1Q9NXB0 559 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 PCDH10Q9P2E7 1040 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 TRBC2A0A5B9 178 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 C1orf226A1L170 272 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 PCP4L1A6NKN8 68 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 A8MUA0 341 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 E7ESA3 106 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 SULT1B1O43704 296 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 SSNA1O43805 119 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 BEST1O76090 585 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 JUNP05412 331 aaKnown RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 AOC1P19801 751 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 GJA5P36382 358 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 RAB28P51157 221 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 GPX6P59796 221 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 VBP1P61758 197 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 ACY1Q03154 408 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 TLR1Q15399 786 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 SLC14A2Q15849 920 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 ZFP69Q49AA0 526 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 ZNF678Q5SXM1 525 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 UBAP2Q5T6F2 1119 aaKnown RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 MANEALQ5VSG8 457 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 METTL2BQ6P1Q9 378 aaKnown RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 USP30Q70CQ3 517 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 OR5T3Q8NGG3 340 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 OR52E4Q8NGH9 312 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 BBS10Q8TAM1 723 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 UFD1Q92890 307 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 MMABQ96EY8 250 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-216ENST00000481242 SP140LQ9H930 580 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 TVP23BQ9NYZ1 205 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 ACTR3BQ9P1U1 418 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 ING4Q9UNL4 249 aa9.15□□□□□ -0.94
GARNL3-216ENST00000481242 FOXO6A8MYZ6 492 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 NPIPA5E9PKD4 350 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 NOS1APO75052 506 aaPredicted RBP9.15□□□□□ -0.95
GARNL3-216ENST00000481242 ADRB3P13945 408 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 NR4A1P22736 598 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 ARCN1P48444 511 aaKnown RBP9.15□□□□□ -0.95
GARNL3-216ENST00000481242 XKP51811 444 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 POU6F2P78424 691 aaPredicted RBP9.15□□□□□ -0.95
GARNL3-216ENST00000481242 DAG1Q14118 895 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 ADGRE1Q14246 886 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 ZNF829Q3KNS6 432 aaPredicted RBP9.15□□□□□ -0.95
GARNL3-216ENST00000481242 ACSBG2Q5FVE4 666 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 OR2T5Q6IEZ7 315 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 NAPRTQ6XQN6 538 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 PIM3Q86V86 326 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 SDR16C5Q8N3Y7 309 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 OR10H4Q8NGA5 316 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 OR2T29Q8NH02 315 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 FATE1Q969F0 183 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 TIGARQ9NQ88 270 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 NLGN3Q9NZ94 848 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 NPIPA1Q9UND3 350 aa9.15□□□□□ -0.95
GARNL3-216ENST00000481242 ANXA2P2A6NMY6 339 aa9.14□□□□□ -0.95
GARNL3-216ENST00000481242 CPNE3O75131 537 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms