RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ARL8BQ9NVJ2 186 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 BAIAP2L1Q9UHR4 511 aa16.76■□□□□ 0.27
UPF3A-206ENST00000480362 MDC1Q14676 2089 aaKnown RBP16.76■□□□□ 0.27
UPF3A-206ENST00000480362 COL5A1P20908 1838 aaPredicted RBP16.75■□□□□ 0.27
UPF3A-206ENST00000480362 ERICH4A6NGS2 130 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 RTCAO00442 366 aaKnown RBP16.75■□□□□ 0.27
UPF3A-206ENST00000480362 TOX3O15405 576 aaPredicted RBP16.75■□□□□ 0.27
UPF3A-206ENST00000480362 P2RX6O15547 441 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 GDF9O60383 454 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 SRPX2O60687 465 aaPredicted RBP16.75■□□□□ 0.27
UPF3A-206ENST00000480362 CBFA2T3O75081 653 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 GP1BAP07359 652 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 ANXA4P09525 319 aaPredicted RBP16.75■□□□□ 0.27
UPF3A-206ENST00000480362 SLC35G6P0C7Q6 338 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 CD1EP15812 388 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 SDC1P18827 310 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 GABRA4P48169 554 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 PLA2G16P53816 162 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 STXBP1P61764 594 aaKnown RBP16.75■□□□□ 0.27
UPF3A-206ENST00000480362 UFM1P61960 85 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 HSD11B2P80365 405 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 KRT72Q14CN4 511 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 CLPPQ16740 277 aaPredicted RBP16.75■□□□□ 0.27
UPF3A-206ENST00000480362 AGKQ53H12 422 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 GALNT18Q6P9A2 607 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 CCDC121Q6ZUS5 278 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 KMT5CQ86Y97 462 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 CSNK1A1LQ8N752 337 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 SLC41A2Q96JW4 573 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 GFM1Q96RP9 751 aaKnown RBP16.75■□□□□ 0.27
UPF3A-206ENST00000480362 PDP2Q9P2J9 529 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 PLCL2Q9UPR0 1127 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 GPR179Q6PRD1 2367 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 RP1P56715 2156 aa16.75■□□□□ 0.27
UPF3A-206ENST00000480362 A0A0G2JN53 185 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 IGHV5-10-1A0A0J9YXX1 117 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 NTN3O00634 580 aaPredicted RBP16.74■□□□□ 0.27
UPF3A-206ENST00000480362 ERI3O43414 337 aaKnown RBP16.74■□□□□ 0.27
UPF3A-206ENST00000480362 PCDH7O60245 1069 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 FOXD2O60548 495 aaPredicted RBP16.74■□□□□ 0.27
UPF3A-206ENST00000480362 SLC22A3O75751 556 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 GBAP04062 536 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 CTSBP07858 339 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 TACR1P25103 407 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 KCNAB1Q14722 419 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 PTGR1Q14914 329 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 HKDC1Q2TB90 917 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 WASHC2DQ5SRD0 308 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 MANEAQ5SRI9 462 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 OR4C11Q6IEV9 310 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 ABHD17CQ6PCB6 329 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 RIPOR1Q6ZS17 1223 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 PAGE2Q7Z2X7 111 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 DGLUCYQ7Z3D6 616 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 ZNF655Q8N720 491 aaPredicted RBP16.74■□□□□ 0.27
UPF3A-206ENST00000480362 SRFBP1Q8NEF9 429 aaKnown RBP16.74■□□□□ 0.27
UPF3A-206ENST00000480362 OR2L5Q8NG80 312 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 OR9I1Q8NGQ6 314 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 CLHC1Q8NHS4 586 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 NSL1Q96IY1 281 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 SLC45A3Q96JT2 553 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 TEX37Q96LM6 180 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 QRFPRQ96P65 431 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 TSSK3Q96PN8 268 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 C17orf62Q9BQA9 187 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 ZNF717Q9BY31 904 aaPredicted RBP16.74■□□□□ 0.27
UPF3A-206ENST00000480362 NLNQ9BYT8 704 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 ACTL8Q9H568 366 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 ZNF768Q9H5H4 540 aaKnown RBP16.74■□□□□ 0.27
UPF3A-206ENST00000480362 LHX9Q9NQ69 397 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 STARD5Q9NSY2 213 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 ZIM2Q9NZV7 527 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 CCDC167Q9P0B6 97 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 MCM8Q9UJA3 840 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 ASXL3Q9C0F0 2248 aa16.74■□□□□ 0.27
UPF3A-206ENST00000480362 DNAH14Q0VDD8 3507 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 LOC100653049A0A140TA62 436 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 GNG14A0A1W2PPG7 69 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 URADA6NGE7 173 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 C4orf51C9J302 202 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 PROB1E7EW31 1015 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 ANKRD28O15084 1053 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 ZSCAN9O15535 394 aaPredicted RBP16.73■□□□□ 0.27
UPF3A-206ENST00000480362 EEDO75530 441 aaKnown RBP16.73■□□□□ 0.27
UPF3A-206ENST00000480362 KRT34O76011 436 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 KLHL18O94889 574 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 CBX6O95503 412 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 ZNF888P0CJ79 500 aaPredicted RBP16.73■□□□□ 0.27
UPF3A-206ENST00000480362 PCSK2P16519 638 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 NELFEP18615 380 aaKnown RBP16.73■□□□□ 0.27
UPF3A-206ENST00000480362 TPP2P29144 1249 aaPredicted RBP16.73■□□□□ 0.27
UPF3A-206ENST00000480362 PRDX6P30041 224 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 ACADVLP49748 655 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 ARFIP1P53367 373 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 RAB8AP61006 207 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 TGM3Q08188 693 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 CCNYL2Q5T2Q4 361 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 TMTC4Q5T4D3 741 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 TRIM40Q6P9F5 258 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 GK5Q6ZS86 529 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms