RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 VTI1BQ9UEU0 232 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 MRPS2Q9Y399 296 aaKnown RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 POLR3HQ9Y535 204 aaPredicted RBP6.13□□□□□ -1.43
HERC4-210ENST00000480158 AP1M2Q9Y6Q5 423 aa6.13□□□□□ -1.43
HERC4-210ENST00000480158 FREM2Q5SZK8 3169 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 LRIT2A6NDA9 550 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 ZNF860A6NHJ4 632 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 EFCAB7A8K855 629 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 C4orf51C9J302 202 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 SLCO1B7G3V0H7 640 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 TM4SF5O14894 197 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 RGS14O43566 566 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 SNX3O60493 162 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 CSO75390 466 aaKnown RBP6.12□□□□□ -1.43
HERC4-210ENST00000480158 OR2B3O76000 313 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 TGDSO95455 350 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 FAM107AO95990 144 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 ZNF888P0CJ79 500 aaPredicted RBP6.12□□□□□ -1.43
HERC4-210ENST00000480158 IL1RNP18510 177 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 ALAS2P22557 587 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 OLR1P78380 273 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 PHEXP78562 749 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 PCDH1Q08174 1060 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 SQSTM1Q13501 440 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 E2F2Q14209 437 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 DEFB134Q4QY38 66 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 ATP6AP1LQ52LC2 224 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 ZC3H12BQ5HYM0 836 aaKnown RBP6.12□□□□□ -1.43
HERC4-210ENST00000480158 TMTC4Q5T4D3 741 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 KHDRBS2Q5VWX1 349 aaKnown RBP6.12□□□□□ -1.43
HERC4-210ENST00000480158 ACAD11Q709F0 780 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 RNF44Q7L0R7 432 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 PRSS41Q7RTY9 318 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 PRSS42Q7Z5A4 293 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 C1orf52Q8N6N3 182 aaKnown RBP6.12□□□□□ -1.43
HERC4-210ENST00000480158 AMER3Q8N944 861 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 FNDC5Q8NAU1 212 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 TRPV3Q8NET8 790 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 OR1L3Q8NH93 324 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 CLHC1Q8NHS4 586 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 WDR48Q8TAF3 677 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 KLHL6Q8WZ60 621 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 SLC41A2Q96JW4 573 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 MAGEB10Q96LZ2 347 aaPredicted RBP6.12□□□□□ -1.43
HERC4-210ENST00000480158 AICDAQ9GZX7 198 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 RHBGQ9H310 441 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 MEAF6Q9HAF1 191 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 TCF7L2Q9NQB0 619 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 KLHL14Q9P2G3 628 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 NDOR1Q9UHB4 597 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 BAIAP2L1Q9UHR4 511 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 PLCL2Q9UPR0 1127 aa6.12□□□□□ -1.43
HERC4-210ENST00000480158 RUVBL1Q9Y265 456 aaKnown RBP6.12□□□□□ -1.43
HERC4-210ENST00000480158 CEP250Q9BV73 2442 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 C9JVG2 144 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 SLC28A1O00337 649 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 LSM1O15116 133 aaKnown RBP6.11□□□□□ -1.43
HERC4-210ENST00000480158 DNAJB6O75190 326 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 FKBP9O95302 570 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 MT-CO3P00414 261 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 NTRK1P04629 796 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 KLK1P06870 262 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 PTX3P26022 381 aaPredicted RBP6.11□□□□□ -1.43
HERC4-210ENST00000480158 AHRP35869 848 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 PIK3CBP42338 1070 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 LIMK1P53667 647 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 MAPK10P53779 464 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 DIO3P55073 304 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 BTN3A2P78410 334 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 E2F1Q01094 437 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 ZFP36L1Q07352 338 aaKnown RBP6.11□□□□□ -1.43
HERC4-210ENST00000480158 RGS1Q08116 209 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 HYAL2Q12891 473 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 NAA25Q14CX7 972 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 ISXQ2M1V0 245 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 C6orf136Q5SQH8 315 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 GKAP1Q5VSY0 366 aaPredicted RBP6.11□□□□□ -1.43
HERC4-210ENST00000480158 C1orf189Q5VU69 101 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 CHSY3Q70JA7 882 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 TRIM46Q7Z4K8 759 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 GPR135Q8IZ08 494 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 D2HGDHQ8N465 521 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 GBP7Q8N8V2 638 aaPredicted RBP6.11□□□□□ -1.43
HERC4-210ENST00000480158 AGBL5Q8NDL9 886 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 OR8K5Q8NH50 307 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 NUDT8Q8WV74 236 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 C10orf82Q8WW14 230 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 GFM2Q969S9 779 aaKnown RBP6.11□□□□□ -1.43
HERC4-210ENST00000480158 PMEPA1Q969W9 287 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 MS4A6EQ96DS6 147 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 CMTM7Q96FZ5 175 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 CATSPER2Q96P56 530 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 MS4A8Q9BY19 250 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 RBCK1Q9BYM8 510 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 SLC7A5P2Q9GIP4 190 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 LRTM1Q9HBL6 345 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 RIC8BQ9NVN3 520 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 PDP2Q9P2J9 529 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 ANKMY1Q9P2S6 941 aa6.11□□□□□ -1.43
HERC4-210ENST00000480158 DHCR7Q9UBM7 475 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms