RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 RECKO95980 971 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 SMIM10L1P0DMW3 83 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 ALOX12P18054 663 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 PTPN4P29074 926 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 ALDH3A1P30838 453 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 RPS15P62841 145 aaKnown RBP18.74■□□□□ 0.59
LIME1-205ENST00000480139 PHEXP78562 749 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 ZRSR2Q15696 482 aaKnown RBP18.74■□□□□ 0.59
LIME1-205ENST00000480139 CPSF6Q16630 551 aaKnown RBP eCLIP18.74■□□□□ 0.59
LIME1-205ENST00000480139 ST3GAL2Q16842 350 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 CRTC2Q53ET0 693 aaPredicted RBP18.74■□□□□ 0.59
LIME1-205ENST00000480139 CFAP157Q5JU67 520 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 ADNP2Q6IQ32 1131 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 LETMD1Q6P1Q0 360 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 OVCH1Q7RTY7 1134 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 WDR20Q8TBZ3 569 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 UTP15Q8TED0 518 aaKnown RBP18.74■□□□□ 0.59
LIME1-205ENST00000480139 SREK1Q8WXA9 508 aaKnown RBP18.74■□□□□ 0.59
LIME1-205ENST00000480139 GAL3ST3Q96A11 431 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 ZBTB9Q96C00 473 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 MS4A6EQ96DS6 147 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 SMIM10Q96HG1 83 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 TRMOQ9BU70 441 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 MS4A8Q9BY19 250 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 WDR54Q9H977 334 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 CLK4Q9HAZ1 481 aaKnown RBP18.74■□□□□ 0.59
LIME1-205ENST00000480139 GPN3Q9UHW5 284 aaPredicted RBP18.74■□□□□ 0.59
LIME1-205ENST00000480139 ZNF225Q9UK10 706 aa18.74■□□□□ 0.59
LIME1-205ENST00000480139 IGLV3-12A0A075B6K2 115 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 A0A0A6YYC8 382 aaPredicted RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 A0A1B0GTL3 188 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 I3L1I5 382 aaPredicted RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 FOXE1O00358 373 aaPredicted RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 GALR3O60755 368 aaPredicted RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 BPGMP07738 259 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 DHRS4L1P0CG22 281 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 PCNAP12004 261 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 TSPAN8P19075 237 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 FBLP22087 321 aaKnown RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 F8A1P23610 371 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 ITPKBP27987 946 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 HNRNPH1P31943 449 aaKnown RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 OR1D4P47884 311 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 TMPRSS3P57727 454 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 MAGOHP61326 146 aaKnown RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 SNRPNP63162 240 aaKnown RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 TMEM35AQ53FP2 167 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 TOR1AIP1Q5JTV8 583 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 ARHGAP40Q5TG30 622 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 FRG2Q64ET8 278 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 GPRIN3Q6ZVF9 776 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 DTWD1Q8N5C7 304 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 METTL27Q8N6F8 245 aaPredicted RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 ENDOVQ8N8Q3 282 aaKnown RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 AMER3Q8N944 861 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 OR2L5Q8NG80 312 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 OR9A4Q8NGU2 314 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 HUS1BQ8NHY5 278 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 ZCCHC10Q8TBK6 192 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 CCT6BQ92526 530 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 MMABQ96EY8 250 aaPredicted RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 FRG2BQ96QU4 278 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 SLC29A3Q9BZD2 475 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 AICDAQ9GZX7 198 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 DMRT3Q9NQL9 472 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 ACSS2Q9NR19 701 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 IL17BQ9UHF5 180 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 FARSAQ9Y285 508 aaKnown RBP18.73■□□□□ 0.59
LIME1-205ENST00000480139 PADI2Q9Y2J8 665 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 MAP4K5Q9Y4K4 846 aa18.73■□□□□ 0.59
LIME1-205ENST00000480139 BIRC5O15392 142 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 EFSO43281 561 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 KLHL18O94889 574 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 ESRRBO95718 433 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 ENO1P06733 434 aaKnown RBP18.72■□□□□ 0.59
LIME1-205ENST00000480139 ZNF888P0CJ79 500 aaPredicted RBP18.72■□□□□ 0.59
LIME1-205ENST00000480139 IL1RNP18510 177 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 SERPINB4P48594 390 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 ARFIP1P53367 373 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 SRSF6Q13247 344 aaKnown RBP18.72■□□□□ 0.59
LIME1-205ENST00000480139 MPP2Q14168 576 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 CCDC81Q6ZN84 652 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 PRSS41Q7RTY9 318 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 SYVN1Q86TM6 617 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 PDSS2Q86YH6 399 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 SRFBP1Q8NEF9 429 aaKnown RBP18.72■□□□□ 0.59
LIME1-205ENST00000480139 AGAP11Q8TF27 550 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 SNRNP27Q8WVK2 155 aaKnown RBP18.72■□□□□ 0.59
LIME1-205ENST00000480139 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.72■□□□□ 0.59
LIME1-205ENST00000480139 COL26A1Q96A83 441 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 CMTM7Q96FZ5 175 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 CNDP1Q96KN2 507 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 ATP6V1G3Q96LB4 118 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 MECRQ9BV79 373 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 GATA5Q9BWX5 397 aaPredicted RBP18.72■□□□□ 0.59
LIME1-205ENST00000480139 REXO4Q9GZR2 422 aaKnown RBP18.72■□□□□ 0.59
LIME1-205ENST00000480139 KLHL31Q9H511 634 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 ACTL8Q9H568 366 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 KCNK9Q9NPC2 374 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 NXT1Q9UKK6 140 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms