RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SYN2Q92777 582 aaPredicted RBP10.94□□□□□ -0.66
USP11-208ENST00000480104 SMARCAL1Q9NZC9 954 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 MYO1AQ9UBC5 1043 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 PCYOX1Q9UHG3 505 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 BIRC6Q9NR09 4857 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 C15orf38-AP3S2A0A0A6YYH1 394 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 MBD3L3A6NE82 208 aaPredicted RBP10.93□□□□□ -0.66
USP11-208ENST00000480104 TCF21O43680 179 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 CREB1P16220 341 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 MC4RP32245 332 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 SSR1P43307 286 aaKnown RBP10.93□□□□□ -0.66
USP11-208ENST00000480104 ZNF140P52738 457 aaPredicted RBP10.93□□□□□ -0.66
USP11-208ENST00000480104 VLDLRP98155 873 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 ZNF750Q32MQ0 723 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 CCSMST1Q4G0I0 132 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 TEX44Q53QW1 395 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 PIANPQ8IYJ0 282 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 C9orf106Q8NAJ2 232 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 KCTD6Q8NC69 237 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 MBD3L2Q8NHZ7 208 aaPredicted RBP10.93□□□□□ -0.66
USP11-208ENST00000480104 HMGCLL1Q8TB92 370 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 MCOLN3Q8TDD5 553 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 ASB15Q8WXK1 588 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 PEX11GQ96HA9 241 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 BTBD6Q96KE9 485 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 TEKT5Q96M29 485 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 TRIB1Q96RU8 372 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 AARSD1Q9BTE6 412 aaKnown RBP10.93□□□□□ -0.66
USP11-208ENST00000480104 ZNF703Q9H7S9 590 aaPredicted RBP10.93□□□□□ -0.66
USP11-208ENST00000480104 LAMP3Q9UQV4 416 aa10.93□□□□□ -0.66
USP11-208ENST00000480104 YARS2Q9Y2Z4 477 aaKnown RBP10.93□□□□□ -0.66
USP11-208ENST00000480104 MALRD1Q5VYJ5 2156 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 GRID2IPA4D2P6 1211 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 C5orf60A6NFR6 353 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 ZNF860A6NHJ4 632 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 A8MUA0 341 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 LMX1BO60663 402 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 OR2J2O76002 312 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 RFPL3SP0C7P2 107 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 EZRP15311 586 aaKnown RBP10.92□□□□□ -0.66
USP11-208ENST00000480104 CDK11BP21127 795 aaKnown RBP10.92□□□□□ -0.66
USP11-208ENST00000480104 SOX3P41225 446 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 BDKRB1P46663 353 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 FAM27E3Q08E93 113 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 HYAL2Q12891 473 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 PIGHQ14442 188 aaPredicted RBP10.92□□□□□ -0.66
USP11-208ENST00000480104 XKR6Q5GH73 641 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 FAM120AOSQ5T036 256 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 RNF187Q5TA31 235 aaPredicted RBP10.92□□□□□ -0.66
USP11-208ENST00000480104 VASNQ6EMK4 673 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 PPP1R2P3Q6NXS1 205 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 PLXDC2Q6UX71 529 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 ZNF704Q6ZNC4 412 aaPredicted RBP10.92□□□□□ -0.66
USP11-208ENST00000480104 PDSS2Q86YH6 399 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 PLD3Q8IV08 490 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 ELOA2Q8IYF1 753 aaPredicted RBP10.92□□□□□ -0.66
USP11-208ENST00000480104 RFLNBQ8N5W9 214 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 PLD5Q8N7P1 536 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 NIPA2Q8N8Q9 360 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 TRMT61AQ96FX7 289 aaKnown RBP10.92□□□□□ -0.66
USP11-208ENST00000480104 ART5Q96L15 291 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 CCDC138Q96M89 665 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 DOCK7Q96N67 2140 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 OR1F2PQ96R84 312 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 TNFRSF13CQ96RJ3 184 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 SYT11Q9BT88 431 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 FSD1LQ9BXM9 530 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 LIN28AQ9H9Z2 209 aaKnown RBP10.92□□□□□ -0.66
USP11-208ENST00000480104 MRPS30Q9NP92 439 aaKnown RBP10.92□□□□□ -0.66
USP11-208ENST00000480104 ZNF223Q9UK11 482 aaPredicted RBP10.92□□□□□ -0.66
USP11-208ENST00000480104 ZDHHC9Q9Y397 364 aa10.92□□□□□ -0.66
USP11-208ENST00000480104 IGHV4-30-2A0A087WSY4 118 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 CD8B2A6NJW9 211 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 OVOL3O00110 214 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 HS3ST1O14792 307 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 HAT1O14929 419 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 PRKNO60260 465 aaPredicted RBP10.91□□□□□ -0.66
USP11-208ENST00000480104 ALX3O95076 343 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 AGTP01019 485 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 IGHV4-39P01824 125 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 FTLP02792 175 aaPredicted RBP10.91□□□□□ -0.66
USP11-208ENST00000480104 CCKARP32238 428 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 COMPP49747 757 aaPredicted RBP10.91□□□□□ -0.66
USP11-208ENST00000480104 CLCN2P51788 898 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 MTTPP55157 894 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 CRYZQ08257 329 aaKnown RBP10.91□□□□□ -0.66
USP11-208ENST00000480104 HSPA14Q0VDF9 509 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 SQLEQ14534 574 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 PDK1Q15118 436 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 ZNF425Q6IV72 752 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 RTL4Q6ZR62 310 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 CAND1Q86VP6 1230 aaKnown RBP10.91□□□□□ -0.66
USP11-208ENST00000480104 ZNF611Q8N823 705 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 ZCCHC10Q8TBK6 192 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 ZC3HAV1LQ96H79 300 aaKnown RBP10.91□□□□□ -0.66
USP11-208ENST00000480104 QRFPRQ96P65 431 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 OLFM3Q96PB7 478 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 MACROD1Q9BQ69 325 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 SFXN3Q9BWM7 321 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 CHODLQ9H9P2 273 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms