RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 JUNDP17535 347 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 GGT1P19440 569 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 ATP6V1B2P21281 511 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 TPP2P29144 1249 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-204ENST00000480057 MSX2P35548 267 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-204ENST00000480057 YBX1P67809 324 aaKnown RBP10.53□□□□□ -0.72
VTI1A-204ENST00000480057 RPL6Q02878 288 aaKnown RBP10.53□□□□□ -0.72
VTI1A-204ENST00000480057 TGM3Q08188 693 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 ABHD18Q0P651 414 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 PLCL1Q15111 1095 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 CCNYL2Q5T2Q4 361 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 ADCK2Q7Z695 626 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 TAF8Q7Z7C8 310 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 SERPINA11Q86U17 422 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 CALHM3Q86XJ0 350 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 GKN2Q86XP6 184 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 FAM160A2Q8N612 972 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-204ENST00000480057 FRMD1Q8N878 549 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 OR7A2PQ8NGA2 310 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 WDR48Q8TAF3 677 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 FLVCR1-AS1Q8TAF5 88 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 NT5CQ8TCD5 201 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 NRG4Q8WWG1 115 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 DNASE2BQ8WZ79 361 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 PPCDCQ96CD2 204 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 ZNF583Q96ND8 569 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 PANX1Q96RD7 426 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 DPH7Q9BTV6 452 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 DUSP15Q9H1R2 295 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-204ENST00000480057 KAT8Q9H7Z6 458 aaKnown RBP10.53□□□□□ -0.72
VTI1A-204ENST00000480057 GORASP2Q9H8Y8 452 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 CCM2LQ9NUG4 571 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-204ENST00000480057 ZNF282Q9UDV7 671 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-204ENST00000480057 EXO1Q9UQ84 846 aaKnown RBP10.53□□□□□ -0.72
VTI1A-204ENST00000480057 INVSQ9Y283 1065 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 AP4S1Q9Y587 144 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 PCDHGA4Q9Y5G9 962 aa10.53□□□□□ -0.72
VTI1A-204ENST00000480057 FANCMQ8IYD8 2048 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 PRAMEF33A0A0G2JMD5 474 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 ELOVL7A1L3X0 281 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 OR2A25A4D2G3 310 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 LRIT2A6NDA9 550 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 STK25O00506 426 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 HAT1O14929 419 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 VILLO15195 856 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 ZW10O43264 779 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 MAP3K13O43283 966 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 LCMT2O60294 686 aaKnown RBP10.52□□□□□ -0.73
VTI1A-204ENST00000480057 GPR37L1O60883 481 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 GUCY1B2O75343 617 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 SCELO95171 688 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 EPN2O95208 641 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 WNT1P04628 370 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 ABCB1P08183 1280 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-204ENST00000480057 LAMP1P11279 417 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 PIM1P11309 404 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-204ENST00000480057 FCGR1AP12314 374 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 GPX2P18283 190 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 IL1RNP18510 177 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 DDCP20711 480 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 PSMA4P25789 261 aaKnown RBP10.52□□□□□ -0.73
VTI1A-204ENST00000480057 BCL6P41182 706 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 GRIA3P42263 894 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 MAPK12P53778 367 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 POLE2P56282 527 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 SESN3P58005 492 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 NXPH1P58417 271 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 MTPNP58546 118 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 TAS2R50P59544 299 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 STXBP1P61764 594 aaKnown RBP10.52□□□□□ -0.73
VTI1A-204ENST00000480057 KLC1Q07866 573 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 C2orf80Q0P641 193 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 GPR18Q14330 331 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 HEPACAMQ14CZ8 416 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 WDR45BQ5MNZ6 344 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 KIAA1614Q5VZ46 1190 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 OR4C11Q6IEV9 310 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 ERICH5Q6P6B1 374 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 RNF111Q6ZNA4 994 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 C11orf74Q86VG3 221 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 NAGSQ8N159 534 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 ZCCHC7Q8N3Z6 543 aaKnown RBP10.52□□□□□ -0.73
VTI1A-204ENST00000480057 FBXL6Q8N531 539 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 PAPD5Q8NDF8 572 aaKnown RBP10.52□□□□□ -0.73
VTI1A-204ENST00000480057 ZNF548Q8NEK5 533 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-204ENST00000480057 OR2T12Q8NG77 320 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 C1orf216Q8TAB5 229 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 SLC37A2Q8TED4 501 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 NUDT8Q8WV74 236 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 GFM2Q969S9 779 aaKnown RBP10.52□□□□□ -0.73
VTI1A-204ENST00000480057 REXO5Q96IC2 774 aaKnown RBP10.52□□□□□ -0.73
VTI1A-204ENST00000480057 NSMCE2Q96MF7 247 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 OR2A14Q96R47 310 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 F2RL3Q96RI0 385 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 NRTNQ99748 197 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 INPP5KQ9BT40 448 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 TBCDQ9BTW9 1192 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 THUMPD3Q9BV44 507 aaKnown RBP10.52□□□□□ -0.73
VTI1A-204ENST00000480057 LRRC61Q9BV99 259 aa10.52□□□□□ -0.73
VTI1A-204ENST00000480057 ROGDIQ9GZN7 287 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms