RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 BTN3A3O00478 584 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 IGFBP6P24592 240 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-208ENST00000478423 HOXD9P28356 352 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-208ENST00000478423 IL12RB1P42701 662 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 ATG9BQ674R7 924 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 NADSYN1Q6IA69 706 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 CPXM2Q8N436 756 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 FBXO27Q8NI29 283 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 DIRAS2Q96HU8 199 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 COX4I2Q96KJ9 171 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 DGAT2Q96PD7 388 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 SORT1Q99523 831 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 NKX2-4Q9H2Z4 354 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 ZNF334Q9HCZ1 680 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-208ENST00000478423 RPL36Q9Y3U8 105 aaKnown RBP13.7□□□□□ -0.22
NPHP4-208ENST00000478423 CCDC182A6NF36 153 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 TNFRSF21O75509 655 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 CD9P21926 228 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 KDELR2P33947 212 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 SUOXP51687 545 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 CLDN8P56748 225 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 OR4D2P58180 307 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 RHAGQ02094 409 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 FRRS1Q6ZNA5 592 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 JPH3Q8WXH2 748 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-208ENST00000478423 HHIPL1Q96JK4 782 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 EIF3FO00303 357 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-208ENST00000478423 LATO43561 262 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 SNX4O95219 450 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 AZGP1P25311 298 aaKnown RBP13.7□□□□□ -0.22
NPHP4-208ENST00000478423 HTR1EP28566 365 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 ZNF140P52738 457 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-208ENST00000478423 RTN4RL1Q86UN2 441 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-208ENST00000478423 OR6K6Q8NGW6 343 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 FAR1Q8WVX9 515 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 MYLIPQ8WY64 445 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 ALPK1Q96QP1 1244 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 RTP3Q9BQQ7 232 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 TAPBPLQ9BX59 468 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 TBL1XR1Q9BZK7 514 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 TOR3AQ9H497 397 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 NEK6Q9HC98 313 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 CCM2LQ9NUG4 571 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-208ENST00000478423 MARCH5Q9NX47 278 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 ZSCAN32Q9NX65 697 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 TCRBV21S2A2A0A5A6 115 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 PPP6CO00743 305 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 KLKB1P03952 638 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 T-ENOLP0DO92 83 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 CD36P16671 472 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 CEBPBP17676 345 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 ACADLP28330 430 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 HLA-FP30511 346 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 QPRTQ15274 297 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 DEFB134Q4QY38 66 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 ZNF542PQ5EBM4 170 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 KIAA1161Q6NSJ0 714 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 ASRGL1Q7L266 308 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 AQP11Q8NBQ7 271 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 MKKSQ9NPJ1 570 aaPredicted RBP13.7□□□□□ -0.22
NPHP4-208ENST00000478423 RHCGQ9UBD6 479 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 PIAS3Q9Y6X2 628 aa13.7□□□□□ -0.22
NPHP4-208ENST00000478423 STRCQ7RTU9 1775 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 ARSAP15289 507 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 C5AR1P21730 350 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 MATN1P21941 496 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 FOXA1P55317 472 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 SLC7A9P82251 487 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 BNC1Q01954 994 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 COL9A2Q14055 689 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-208ENST00000478423 CCNIQ14094 377 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 GRIN2CQ14957 1233 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 CRTC2Q53ET0 693 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-208ENST00000478423 RPTNQ6XPR3 784 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 UTS2BQ765I0 119 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 SLC9B2Q86UD5 537 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 GRHL3Q8TE85 626 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 IPCEF1Q8WWN9 437 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-208ENST00000478423 FCGR1BQ92637 280 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 YTHDF1Q9BYJ9 559 aaKnown RBP13.69□□□□□ -0.22
NPHP4-208ENST00000478423 SLC17A9Q9BYT1 436 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 TNFRSF10BO14763 440 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 EEDO75530 441 aaKnown RBP13.69□□□□□ -0.22
NPHP4-208ENST00000478423 SOX14O95416 240 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 HMGN1P05114 100 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 FGF4P08620 206 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 PRDX3P30048 256 aaKnown RBP13.69□□□□□ -0.22
NPHP4-208ENST00000478423 PSMD7P51665 324 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 HNRNPA1L2Q32P51 320 aaKnown RBP13.69□□□□□ -0.22
NPHP4-208ENST00000478423 CYP27C1Q4G0S4 372 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 KLHL22Q53GT1 634 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 RBM48Q5RL73 367 aaKnown RBP13.69□□□□□ -0.22
NPHP4-208ENST00000478423 KANK2Q63ZY3 851 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 ANKLE1Q8NAG6 615 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 SHKBP1Q8TBC3 707 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 FGF13Q92913 245 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 RHBDF1Q96CC6 855 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 COQ7Q99807 217 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 NDC1Q9BTX1 674 aa13.69□□□□□ -0.22
NPHP4-208ENST00000478423 GPR174Q9BXC1 333 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms