RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 SP1P08047 785 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 HIST1H2AGP0C0S8 130 aaPredicted RBP15.68■□□□□ 0.1
TRIM13-208ENST00000478111 CD46P15529 392 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 ALOX12P18054 663 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 HIST1H2ADP20671 130 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 AGAP20933 346 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 EEF1DP29692 281 aaKnown RBP15.68■□□□□ 0.1
TRIM13-208ENST00000478111 PTGER4P35408 488 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 OR4D2P58180 307 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 ALDH6A1Q02252 535 aaKnown RBP15.68■□□□□ 0.1
TRIM13-208ENST00000478111 DEFB134Q4QY38 66 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 CATSPEREQ5SY80 951 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 GALNTL5Q7Z4T8 443 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 STRA8Q7Z7C7 330 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 KIF2BQ8N4N8 673 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 SLC5A8Q8N695 610 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 HIST1H2AHQ96KK5 128 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 HIST1H2AJQ99878 128 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 TRIM51Q9BSJ1 452 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 H2AFJQ9BTM1 129 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 CDCP1Q9H5V8 836 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 ARL15Q9NXU5 204 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 IKZF3Q9UKT9 509 aa15.68■□□□□ 0.1
TRIM13-208ENST00000478111 NPIPA5E9PKD4 350 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 C19orf84I3L1E1 186 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 PGRMC1O00264 195 aaKnown RBP15.67■□□□□ 0.1
TRIM13-208ENST00000478111 ZNHIT1O43257 154 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 SNRPB2P08579 225 aaKnown RBP15.67■□□□□ 0.1
TRIM13-208ENST00000478111 SCTRP47872 440 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 FNTAP49354 379 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 AP1S2P56377 157 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 BTG2P78543 158 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 HYAL2Q12891 473 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 RNFT1Q5M7Z0 435 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 SPANXN3Q5MJ09 141 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 SLC25A25Q6KCM7 469 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 KIAA0408Q6ZU52 694 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.67■□□□□ 0.1
TRIM13-208ENST00000478111 GALNT7Q86SF2 657 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 RPS19BP1Q86WX3 136 aaKnown RBP15.67■□□□□ 0.1
TRIM13-208ENST00000478111 ZNF295-AS1Q8N0V1 137 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 TMEM178AQ8NBL3 297 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 NT5CQ8TCD5 201 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 ACTRT1Q8TDG2 376 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 UTP15Q8TED0 518 aaKnown RBP15.67■□□□□ 0.1
TRIM13-208ENST00000478111 NEIL2Q969S2 332 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 FBXL8Q96CD0 374 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 TRIM8Q9BZR9 551 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 TRIM45Q9H8W5 580 aaPredicted RBP15.67■□□□□ 0.1
TRIM13-208ENST00000478111 LRFN1Q9P244 771 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 ZFP69BQ9UJL9 534 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 NPIPA1Q9UND3 350 aa15.67■□□□□ 0.1
TRIM13-208ENST00000478111 ZNF407Q9C0G0 2248 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 CDK2AP1O14519 115 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 DNALI1O14645 258 aaPredicted RBP15.66■□□□□ 0.1
TRIM13-208ENST00000478111 NDC80O14777 642 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 ASNA1O43681 348 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 B4GALT2O60909 372 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 TTC4O95801 387 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 ZNF888P0CJ79 500 aaPredicted RBP15.66■□□□□ 0.1
TRIM13-208ENST00000478111 SMIM10L1P0DMW3 83 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 CASP6P55212 293 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 IL2P60568 153 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 OC90Q02509 493 aaPredicted RBP15.66■□□□□ 0.1
TRIM13-208ENST00000478111 TEDDM1Q5T9Z0 273 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 SBSNQ6UWP8 590 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 NCCRP1Q6ZVX7 275 aaPredicted RBP15.66■□□□□ 0.1
TRIM13-208ENST00000478111 GDF7Q7Z4P5 450 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 ANKRD53Q8N9V6 530 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 NFAM1Q8NET5 270 aaPredicted RBP15.66■□□□□ 0.1
TRIM13-208ENST00000478111 GRK7Q8WTQ7 553 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 SLC5A11Q8WWX8 675 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 CERS2Q96G23 380 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 SMIM10Q96HG1 83 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 MAGED4Q96JG8 741 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 PTCHD1Q96NR3 888 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 NAP1L3Q99457 506 aaPredicted RBP15.66■□□□□ 0.1
TRIM13-208ENST00000478111 OLFM1Q99784 485 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 AICDAQ9GZX7 198 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 MEMO1Q9Y316 297 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 C2CD3Q4AC94 2353 aa15.66■□□□□ 0.1
TRIM13-208ENST00000478111 IGKV3D-11A0A0A0MRZ8 115 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 C4orf51C9J302 202 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 NRDCO43847 1150 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 SERPIND1P05546 499 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 ESRRAP11474 423 aaPredicted RBP15.65■□□□□ 0.1
TRIM13-208ENST00000478111 IVDP26440 423 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 TPP2P29144 1249 aaPredicted RBP15.65■□□□□ 0.1
TRIM13-208ENST00000478111 AHRP35869 848 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 MLF1P58340 268 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 TAS2R50P59544 299 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 PPP1R3AQ16821 1122 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 HECTD2Q5U5R9 776 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 QSOX2Q6ZRP7 698 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 FGD2Q7Z6J4 655 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 ARMC10Q8N2F6 343 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 HORMAD2Q8N7B1 307 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 PDLIM5Q96HC4 596 aaKnown RBP15.65■□□□□ 0.1
TRIM13-208ENST00000478111 LURAP1Q96LR2 239 aa15.65■□□□□ 0.1
TRIM13-208ENST00000478111 PHF12Q96QT6 1004 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms