RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 PLAG1Q6DJT9 500 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 KLHL17Q6TDP4 642 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 RASAL3Q86YV0 1011 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 OR8H3Q8N146 312 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 PGBD3Q8N328 593 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 GPR152Q8TDT2 470 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 DNAJA4Q8WW22 397 aaPredicted RBP12.95□□□□□ -0.34
DFFB-209ENST00000477548 FATE1Q969F0 183 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 PMEPA1Q969W9 287 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 C7orf34Q96L11 122 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 NIPSNAP1Q9BPW8 284 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 FKBPLQ9UIM3 349 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 PPT2Q9UMR5 302 aa12.95□□□□□ -0.34
DFFB-209ENST00000477548 LOC730098B7Z3J9 87 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 ZNF670-ZNF695F2Z2N8 137 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 RAMP2O60895 175 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 ARHGEF15O94989 841 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 CCNB2O95067 398 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 SCG5P05408 212 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 ACADMP11310 421 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 TACR1P25103 407 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 BRCC3P46736 316 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 CDC42P60953 191 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 TEKQ02763 1124 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 CPSF6Q16630 551 aaKnown RBP eCLIP12.94□□□□□ -0.34
DFFB-209ENST00000477548 TRIQKQ629K1 86 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 SBSNQ6UWP8 590 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 ZNF598Q86UK7 904 aaKnown RBP12.94□□□□□ -0.34
DFFB-209ENST00000477548 CDH24Q86UP0 819 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 PTOV1Q86YD1 416 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 FAM9CQ8IZT9 166 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 BTN2A2Q8WVV5 523 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 SMIM14Q96QK8 99 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 SPATA9Q9BWV2 254 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 RERGLQ9H628 205 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 BPIFA1Q9NP55 256 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 CLN6Q9NWW5 311 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 ELOVL2Q9NXB9 296 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 SEC14L4Q9UDX3 406 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 STOML2Q9UJZ1 356 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 SSR3Q9UNL2 185 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 LRRC72A6NJI9 287 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 WASHC1A8K0Z3 465 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 MYL12BO14950 172 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 TAPBPO15533 448 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 AP2A2O94973 939 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 CPSF4O95639 269 aaKnown RBP12.94□□□□□ -0.34
DFFB-209ENST00000477548 ANXA8P13928 327 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 MYL12AP19105 171 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 TNNI3P19429 210 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 EVI2BP34910 448 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 PXNP49023 591 aaPredicted RBP12.94□□□□□ -0.34
DFFB-209ENST00000477548 IL10RBQ08334 325 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 HNRNPA0Q13151 305 aaKnown RBP12.94□□□□□ -0.34
DFFB-209ENST00000477548 ZNF267Q14586 743 aaPredicted RBP12.94□□□□□ -0.34
DFFB-209ENST00000477548 WSCD2Q2TBF2 565 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 IQCCQ4KMZ1 466 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 UBXN11Q5T124 520 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 ZBTB37Q5TC79 503 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 PTCHD4Q6ZW05 846 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 KCTD20Q7Z5Y7 419 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 SLC34A3Q8N130 599 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 LGI4Q8N135 537 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 FAM181AQ8N9Y4 354 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 SLAIN1Q8ND83 568 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 MSANTD3Q96H12 275 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 MIXL1Q9H2W2 232 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 TMEM248Q9NWD8 314 aa12.94□□□□□ -0.34
DFFB-209ENST00000477548 DNMT3AQ9Y6K1 912 aaPredicted RBP12.94□□□□□ -0.34
DFFB-209ENST00000477548 FAM240BA0A1B0GVZ2 78 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 WWP2O00308 870 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 ADAMDEC1O15204 470 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 ACVRL1P37023 503 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 KIR3DL1P43629 444 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 CDH12P55289 794 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 KCNJ10P78508 379 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 SPIBQ01892 262 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.93□□□□□ -0.34
DFFB-209ENST00000477548 MZT2BQ6NZ67 158 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 GDPGP1Q6ZNW5 385 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 CIR1Q86X95 450 aaPredicted RBP12.93□□□□□ -0.34
DFFB-209ENST00000477548 MDGA1Q8NFP4 955 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 TMEM40Q8WWA1 233 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 ACPTQ9BZG2 426 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 UCKL1Q9NWZ5 548 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 CNOT2Q9NZN8 540 aaKnown RBP12.93□□□□□ -0.34
DFFB-209ENST00000477548 NLKQ9UBE8 527 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 STUB1Q9UNE7 303 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 MAGEB17A8MXT2 336 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 SLC22A5O76082 557 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 GLUD1P00367 558 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 TNFRSF1BP20333 461 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 HAAOP46952 286 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 RRAS2P62070 204 aaPredicted RBP12.93□□□□□ -0.34
DFFB-209ENST00000477548 DSC3Q14574 896 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 DUOXA1Q1HG43 343 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 DDI2Q5TDH0 399 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 ATP6V1C2Q8NEY4 427 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 OR9Q1Q8NGQ5 310 aa12.93□□□□□ -0.34
DFFB-209ENST00000477548 TMEM80Q96HE8 168 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms