RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CHAF1BQ13112 559 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 KCNC3Q14003 757 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 LRRC26Q2I0M4 334 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 DCAF4L1Q3SXM0 396 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 CCDC40Q4G0X9 1142 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 ATF7IP2Q5U623 682 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 ZDHHC20Q5W0Z9 365 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 TMEM198Q66K66 360 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 TWF2Q6IBS0 349 aaKnown RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 ARMCX5Q6P1M9 558 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 NOTUMQ6P988 496 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 C11orf57Q6ZUT1 292 aaPredicted RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 ANKRD33Q7Z3H0 272 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 CSGALNACT2Q8N6G5 542 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 TMEM161BQ8NDZ6 487 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 WDR20Q8TBZ3 569 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 PPP4R1Q8TF05 950 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 SCFD1Q8WVM8 642 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 SEPT8Q92599 483 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 P2RX5Q93086 422 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 PHF21AQ96BD5 680 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 OXNAD1Q96HP4 312 aaPredicted RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 RSRC1Q96IZ7 334 aaKnown RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 CEP295NLQ96MC4 621 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 GAD1Q99259 594 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 SRSF8Q9BRL6 282 aaKnown RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 DCTN5Q9BTE1 182 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 TEX12Q9BXU0 123 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 NFKBIZQ9BYH8 718 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 TRIM6Q9C030 488 aaPredicted RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 HRH4Q9H3N8 390 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 PSD3Q9NYI0 1048 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 RWDD2AQ9UIY3 292 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 PIN4Q9Y237 131 aaKnown RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 PRSS21Q9Y6M0 314 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 TANC1Q9C0D5 1861 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 CITO14578 2027 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 ADGRA3Q8IWK6 1321 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 LNP1A1A4G5 178 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 OR2M5A3KFT3 312 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 TRIM49BA6NDI0 452 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 C5orf60A6NFR6 353 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 H3BQ06 376 aaPredicted RBP3.67□□□□□ -1.82
UBR3-209ENST00000477461 PLOD2O00469 737 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 PES1O00541 588 aaKnown RBP3.67□□□□□ -1.82
UBR3-209ENST00000477461 OGTO15294 1046 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 NDUFS4O43181 175 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 PLPP2O43688 288 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 TSPAN1O60635 241 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 TOM1L1O75674 476 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 WISP2O76076 250 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 GNA14O95837 355 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 TIMP1P01033 207 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 PIGRP01833 764 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 CHRNA1P02708 482 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 TPM3P06753 285 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 KRT19P08727 400 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 IQCF3P0C7M6 154 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 MCF2P10911 925 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 CSF2RAP15509 400 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 ARF4P18085 180 aaPredicted RBP3.67□□□□□ -1.82
UBR3-209ENST00000477461 MSH3P20585 1137 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 NR2F2P24468 414 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 CD52P31358 61 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 RFC2P35250 354 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 MTIF2P46199 727 aaKnown RBP3.67□□□□□ -1.82
UBR3-209ENST00000477461 CCL23P55773 120 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 FKBP3Q00688 224 aaKnown RBP3.67□□□□□ -1.82
UBR3-209ENST00000477461 SPAG1Q07617 926 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 MGAT3Q09327 533 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 KYAT1Q16773 422 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 MEP1AQ16819 746 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 C15orf59Q2T9L4 293 aaPredicted RBP3.67□□□□□ -1.82
UBR3-209ENST00000477461 ZFP69Q49AA0 526 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 FILIP1LQ4L180 1135 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 CENPPQ6IPU0 288 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 FAM43BQ6ZT52 329 aaPredicted RBP3.67□□□□□ -1.82
UBR3-209ENST00000477461 DEFB128Q7Z7B8 93 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 FAM228AQ86W67 206 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 THNSL1Q8IYQ7 743 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 GPD1LQ8N335 351 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 C1orf52Q8N6N3 182 aaKnown RBP3.67□□□□□ -1.82
UBR3-209ENST00000477461 XXYLT1Q8NBI6 393 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 GSDMBQ8TAX9 411 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 SMPDL3BQ92485 455 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 ANP32BQ92688 251 aaKnown RBP3.67□□□□□ -1.82
UBR3-209ENST00000477461 CCDC51Q96ER9 411 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 SAT2Q96F10 170 aaPredicted RBP3.67□□□□□ -1.82
UBR3-209ENST00000477461 CPB2Q96IY4 423 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 EGFL8Q99944 293 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 BPIFA3Q9BQP9 254 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 PYGO2Q9BRQ0 406 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 FUCA2Q9BTY2 467 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 CCDC94Q9BW85 323 aaPredicted RBP3.67□□□□□ -1.82
UBR3-209ENST00000477461 FTHL17Q9BXU8 183 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 FGFBP2Q9BYJ0 223 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 FZD8Q9H461 694 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 OSGEPL1Q9H4B0 414 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 RAD21L1Q9H4I0 556 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 THAP9Q9H5L6 903 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms