RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	ACVR1C	Q8NER5	493 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	DEFB124	Q8NES8	71 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	OR2I1P	Q8NGU4	316 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CFAP61	Q8NHU2	1237 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	IFI44	Q8TCB0	444 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MCOLN3	Q8TDD5	553 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	STON2	Q8WXE9	905 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ATL1	Q8WXF7	558 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SLC9A6	Q92581	669 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	LPGAT1	Q92604	370 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TFG	Q92734	400 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	N4BP2L2	Q92802	583 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	RAD51AP1	Q96B01	352 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	NACC2	Q96BF6	587 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SLC22A18	Q96BI1	424 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MTBP	Q96DY7	904 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ATXN7L3B	Q96GX2	97 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	GFM1	Q96RP9	751 aa	Known RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	STRADB	Q9C0K7	418 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	IQCG	Q9H095	443 aa	Known RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	WWP1	Q9H0M0	922 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	QRSL1	Q9H0R6	528 aa	Known RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	STMN4	Q9H169	189 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TCEAL2	Q9H3H9	227 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SRMS	Q9H3Y6	488 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	RHOJ	Q9H4E5	214 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	POPDC3	Q9HBV1	291 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ZDHHC18	Q9NUE0	388 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MOCS1	Q9NZB8	636 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	NINJ2	Q9NZG7	142 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FAM30A	Q9NZY2	134 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	KLHL42	Q9P2K6	505 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PSMD13	Q9UNM6	376 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TDRKH	Q9Y2W6	561 aa	Known RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	DHRS7	Q9Y394	339 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PCDHGA1	Q9Y5H4	931 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SLCO1B1	Q9Y6L6	691 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289		V9GYY5	206 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TRIO	O75962	3097 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PLXNA2	O75051	1894 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TLDC2	A0PJX2	215 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	EME2	A4GXA9	379 aa	Predicted RBP	4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FAM159B	A6NKW6	160 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SYCE1L	A8MT33	242 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	GAPDHS	O14556	408 aa	Predicted RBP	4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SLC16A5	O15375	505 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	GPR39	O43194	453 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	RIPK2	O43353	540 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	NIPSNAP2	O75323	286 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TCEA3	O75764	348 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	C1QL1	O75973	258 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	KCNK5	O95279	499 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	AHSG	P02765	367 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	C8G	P07360	202 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ABHD2	P08910	425 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SNRPA	P09012	282 aa	Known RBP	4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PRSS56	P0CW18	603 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MPC1L	P0DKB6	136 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MTHFD1	P11586	935 aa	Known RBP	4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CD59	P13987	128 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	JUP	P14923	745 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FPR1	P21462	350 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CD9	P21926	228 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ACP1	P24666	158 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ECHS1	P30084	290 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CCR7	P32248	378 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SHMT2	P34897	504 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FASLG	P48023	281 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	LIMK2	P53671	638 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ELL	P55199	621 aa	Predicted RBP	4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MAZ	P56270	477 aa	Known RBP	4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ATP6V0D1	P61421	351 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CXADR	P78310	365 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MPP1	Q00013	466 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ABR	Q12979	859 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	DNAJC3	Q13217	504 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TSTA3	Q13630	321 aa	Predicted RBP	4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SLC29A2	Q14542	456 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SEMA3A	Q14563	771 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FASTKD3	Q14CZ7	662 aa	Known RBP	4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	RPE65	Q16518	533 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	KCTD19	Q17RG1	926 aa	Predicted RBP	4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FAM83E	Q2M2I3	478 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	AMZ1	Q400G9	498 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SPDYE7P	Q495Y7	208 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TPRG1L	Q5T0D9	272 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TMTC4	Q5T4D3	741 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	THEMIS2	Q5TEJ8	643 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CNST	Q6PJW8	725 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	KDM7A	Q6ZMT4	941 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289		Q6ZNX1	250 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	RBM44	Q6ZP01	1051 aa	Known RBP	4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	GLRX5	Q86SX6	157 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	DCUN1D3	Q8IWE4	304 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SLC35F3	Q8IY50	421 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SLC25A45	Q8N413	288 aa		4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	RIBC1	Q8N443	379 aa	Predicted RBP	4.35	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SFRP1	Q8N474	314 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms