RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 FTCDO95954 541 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 ETS1P14921 441 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 SNRPNP63162 240 aaKnown RBP11.79□□□□□ -0.52
SKA3-206ENST00000475251 KIF5AQ12840 1032 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 CMPK2Q5EBM0 449 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 NEPROQ6NW34 567 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 QSOX2Q6ZRP7 698 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 UBE2R2Q712K3 238 aaPredicted RBP11.79□□□□□ -0.52
SKA3-206ENST00000475251 SLC26A11Q86WA9 606 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 SULF2Q8IWU5 870 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 CYP4X1Q8N118 509 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 CYP4Z2PQ8N1L4 340 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 ARMC10Q8N2F6 343 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 KIF2BQ8N4N8 673 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 TMEM156Q8N614 296 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 MFSD9Q8NBP5 474 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 ARMC2Q8NEN0 867 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 HES6Q96HZ4 224 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 CCDC138Q96M89 665 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 MACROD1Q9BQ69 325 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 DEFB126Q9BYW3 111 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 UCK2Q9BZX2 261 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 TRIM5Q9C035 493 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 SLC6A16Q9GZN6 736 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 TSPY26PQ9H489 355 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 CLK4Q9HAZ1 481 aaKnown RBP11.79□□□□□ -0.52
SKA3-206ENST00000475251 TIMMDC1Q9NPL8 285 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 GALPQ9UBC7 116 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 SOX13Q9UN79 622 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 COMMD10Q9Y6G5 202 aa11.79□□□□□ -0.52
SKA3-206ENST00000475251 FAM237BA0A1B0GVD1 139 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 FEZF1A0PJY2 475 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 CTAGE9A4FU28 777 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 ZNF860A6NHJ4 632 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 FIGNL2A6NMB9 653 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 NDUFS4O43181 175 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 KLK8O60259 260 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 GALR3O60755 368 aaPredicted RBP11.78□□□□□ -0.52
SKA3-206ENST00000475251 FOSL1P15407 271 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 KLK2P20151 261 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 MGAT1P26572 445 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 RPL22P35268 128 aaKnown RBP11.78□□□□□ -0.52
SKA3-206ENST00000475251 PEX19P40855 299 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 CLCN2P51788 898 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 SARNPP82979 210 aaKnown RBP11.78□□□□□ -0.52
SKA3-206ENST00000475251 CDK16Q00536 496 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 RGS1Q08116 209 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 PMPCAQ10713 525 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 PWP1Q13610 501 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 CUL1Q13616 776 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 RGS9BPQ6ZS82 235 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 CENPUQ71F23 418 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 ABHD13Q7L211 337 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 ZNF227Q86WZ6 799 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 SLC13A5Q86YT5 568 aaPredicted RBP11.78□□□□□ -0.52
SKA3-206ENST00000475251 PALM2Q8IXS6 379 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 MMP21Q8N119 569 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 RNF214Q8ND24 703 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 OR5M3Q8NGP4 307 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 C1orf54Q8WWF1 131 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 SEC16BQ96JE7 1060 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 PTCHD1Q96NR3 888 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 SYBUQ9NX95 663 aa11.78□□□□□ -0.52
SKA3-206ENST00000475251 DNAJB12Q9NXW2 375 aaKnown RBP11.78□□□□□ -0.52
SKA3-206ENST00000475251 REXO2Q9Y3B8 237 aaKnown RBP11.78□□□□□ -0.52
SKA3-206ENST00000475251 OR14I1A6ND48 311 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 PABPN1LA6NDY0 278 aaKnown RBP11.77□□□□□ -0.53
SKA3-206ENST00000475251 URADA6NGE7 173 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 FAM47E-STBD1D6RA91 191 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 PSMD12O00232 456 aaPredicted RBP11.77□□□□□ -0.53
SKA3-206ENST00000475251 BCKDKO14874 412 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 CHST10O43529 356 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 B4GALT2O60909 372 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 TUBB4AP04350 444 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 ALOX12P18054 663 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 TPSB2P20231 275 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 COILP38432 576 aaPredicted RBP11.77□□□□□ -0.53
SKA3-206ENST00000475251 RFC3P40938 356 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 SNX1Q13596 522 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 TPSAB1Q15661 275 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 ZNF470Q6ECI4 717 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 LCTLQ6UWM7 567 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 CES3Q6UWW8 571 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 KIAA0408Q6ZU52 694 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 PRUNE1Q86TP1 453 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 CCDC71Q8IV32 467 aaPredicted RBP11.77□□□□□ -0.53
SKA3-206ENST00000475251 GPALPP1Q8IXQ4 340 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 SHISA5Q8N114 240 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 AFAP1L2Q8N4X5 818 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 GPATCH11Q8N954 259 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 ZNF740Q8NDX6 193 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 ACRBPQ8NEB7 543 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 OR5T3Q8NGG3 340 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 OR10Q1Q8NGQ4 319 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 CREB3L4Q8TEY5 395 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 HAUS8Q9BT25 410 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 POLDIP3Q9BY77 421 aaKnown RBP11.77□□□□□ -0.53
SKA3-206ENST00000475251 PRDM9Q9NQV7 894 aa11.77□□□□□ -0.53
SKA3-206ENST00000475251 CCM2LQ9NUG4 571 aaPredicted RBP11.77□□□□□ -0.53
SKA3-206ENST00000475251 SAMD15Q9P1V8 674 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms