RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 TIGD1Q96MW7 591 aa7.41□□□□□ -1.22
USP54-211ENST00000474929 PCDHB18PQ96TA0 734 aa7.41□□□□□ -1.22
USP54-211ENST00000474929 FSD1LQ9BXM9 530 aa7.41□□□□□ -1.22
USP54-211ENST00000474929 PHACTR1Q9C0D0 580 aa7.41□□□□□ -1.22
USP54-211ENST00000474929 GOLPH3LQ9H4A5 285 aa7.41□□□□□ -1.22
USP54-211ENST00000474929 ANKHQ9HCJ1 492 aa7.41□□□□□ -1.22
USP54-211ENST00000474929 MRPL47Q9HD33 250 aaKnown RBP7.41□□□□□ -1.22
USP54-211ENST00000474929 RYDENQ9NUL5 291 aaKnown RBP7.41□□□□□ -1.22
USP54-211ENST00000474929 KLHL28Q9NXS3 571 aa7.41□□□□□ -1.22
USP54-211ENST00000474929 STOX2Q9P2F5 926 aaPredicted RBP7.41□□□□□ -1.22
USP54-211ENST00000474929 FBXW2Q9UKT8 454 aa7.41□□□□□ -1.22
USP54-211ENST00000474929 C15orf38-AP3S2A0A0A6YYH1 394 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 TRBV11-1A0A0K0K1C0 115 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 SLC5A10A0PJK1 596 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 TMEM89A2RUT3 159 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 A8MXE2 369 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 KIAA0513O60268 411 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 ADAM11O75078 769 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 CRTAMO95727 393 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 FESP07332 822 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 BCL6P41182 706 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 NR0B1P51843 470 aaKnown RBP7.4□□□□□ -1.22
USP54-211ENST00000474929 PIGHQ14442 188 aaPredicted RBP7.4□□□□□ -1.22
USP54-211ENST00000474929 SLC1A5Q15758 541 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 BBS9Q3SYG4 887 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 SIRPB2Q5JXA9 342 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 SH2D5Q6ZV89 423 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 SYDE1Q6ZW31 735 aaPredicted RBP7.4□□□□□ -1.22
USP54-211ENST00000474929 SLC22A15Q8IZD6 547 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 RASGEF1CQ8N431 466 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 OR4K2Q8NGD2 314 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 OR9A4Q8NGU2 314 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 MAGEC3Q8TD91 643 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 NAT14Q8WUY8 206 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 VMP1Q96GC9 406 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 HS3ST6Q96QI5 342 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 TRIB1Q96RU8 372 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 DPH7Q9BTV6 452 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 FAM129AQ9BZQ8 928 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 EML4Q9HC35 981 aaKnown RBP7.4□□□□□ -1.22
USP54-211ENST00000474929 GLOD4Q9HC38 313 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 MRPS30Q9NP92 439 aaKnown RBP7.4□□□□□ -1.22
USP54-211ENST00000474929 SPATA7Q9P0W8 599 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 HCN3Q9P1Z3 774 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 FKBPLQ9UIM3 349 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 RWDD2AQ9UIY3 292 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 MAN1B1Q9UKM7 699 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 LAMP3Q9UQV4 416 aa7.4□□□□□ -1.22
USP54-211ENST00000474929 ROS1P08922 2347 aa7.4□□□□□ -1.23
USP54-211ENST00000474929 DOCK7Q96N67 2140 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 PES1O00541 588 aaKnown RBP7.39□□□□□ -1.23
USP54-211ENST00000474929 TMPRSS2O15393 492 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 BUD23O43709 281 aaKnown RBP7.39□□□□□ -1.23
USP54-211ENST00000474929 GPRIN2O60269 458 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 OR10H2O60403 315 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 ZFAND5O76080 213 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 CELA3AP09093 270 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 OR56A5P0C7T3 313 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 PPP3CBP16298 524 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 IL1R2P27930 398 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 GCKP35557 465 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 CD79BP40259 229 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 WNT3AP56704 352 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 CRYZQ08257 329 aaKnown RBP7.39□□□□□ -1.23
USP54-211ENST00000474929 ITIH4Q14624 930 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 PDK2Q15119 407 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 TMED2Q15363 201 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 OCLNQ16625 522 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 PHKG1Q16816 387 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 HADHQ16836 314 aaKnown RBP7.39□□□□□ -1.23
USP54-211ENST00000474929 TPD52L1Q16890 204 aaPredicted RBP7.39□□□□□ -1.23
USP54-211ENST00000474929 RNF187Q5TA31 235 aaPredicted RBP7.39□□□□□ -1.23
USP54-211ENST00000474929 DPY19L2P1Q6NXN4 242 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 OPN5Q6U736 354 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 LYPD8Q6UX82 237 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 PACS1Q6VY07 963 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 QSOX2Q6ZRP7 698 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 FMR1NBQ8N0W7 255 aaPredicted RBP7.39□□□□□ -1.23
USP54-211ENST00000474929 CYP4X1Q8N118 509 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 LRRC25Q8N386 305 aaPredicted RBP7.39□□□□□ -1.23
USP54-211ENST00000474929 C2orf73Q8N5S3 287 aaPredicted RBP7.39□□□□□ -1.23
USP54-211ENST00000474929 AMER2Q8N7J2 671 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 B3GNT7Q8NFL0 401 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 OR2A1Q8NGT9 310 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 SPATA22Q8NHS9 363 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 GSDMBQ8TAX9 411 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 FBXW5Q969U6 566 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 MARK4Q96L34 752 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 WFIKKN1Q96NZ8 548 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 IL17FQ96PD4 163 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 OR2A5Q96R48 311 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 EBNA1BP2Q99848 306 aaKnown RBP7.39□□□□□ -1.23
USP54-211ENST00000474929 SLC39A3Q9BRY0 314 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 RBM4Q9BWF3 364 aaKnown RBP7.39□□□□□ -1.23
USP54-211ENST00000474929 ALG2Q9H553 416 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 CHODLQ9H9P2 273 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 ELOVL5Q9NYP7 299 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 AIPL1Q9NZN9 384 aa7.39□□□□□ -1.23
USP54-211ENST00000474929 A0A096LNT2 108 aa7.38□□□□□ -1.23
USP54-211ENST00000474929 TRBV5-4A0A0C4DH59 114 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms