RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 RMDN1Q96DB5 314 aa3.2□□□□□ -1.9
SSB-210ENST00000474273 HNRNPABQ99729 332 aaKnown RBP3.2□□□□□ -1.9
SSB-210ENST00000474273 CCDC28BQ9BUN5 200 aa3.2□□□□□ -1.9
SSB-210ENST00000474273 SLC25A23Q9BV35 468 aa3.2□□□□□ -1.9
SSB-210ENST00000474273 OCR1Q9BZK8 76 aa3.2□□□□□ -1.9
SSB-210ENST00000474273 IL1RAPQ9NPH3 570 aa3.2□□□□□ -1.9
SSB-210ENST00000474273 PHPT1Q9NRX4 125 aaPredicted RBP3.2□□□□□ -1.9
SSB-210ENST00000474273 HEG1Q9ULI3 1381 aa3.2□□□□□ -1.9
SSB-210ENST00000474273 TMEM150CB9EJG8 249 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 INPP4BO15327 924 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 KIF5CO60282 957 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 PRAF2O60831 178 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 SH3BGRLO75368 114 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 LMO2P25791 158 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 EEF1DP29692 281 aaKnown RBP3.19□□□□□ -1.9
SSB-210ENST00000474273 RIDAP52758 137 aaKnown RBP3.19□□□□□ -1.9
SSB-210ENST00000474273 ABCE1P61221 599 aaKnown RBP3.19□□□□□ -1.9
SSB-210ENST00000474273 IL10RBQ08334 325 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 RNF212Q495C1 297 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 SPANXN4Q5MJ08 99 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 C5orf24Q7Z6I8 188 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 PCGF5Q86SE9 256 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 RHOXF1Q8NHV9 184 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 C11orf52Q96A22 123 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 LURAP1Q96LR2 239 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 RMDN2Q96LZ7 410 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 KATNB1Q9BVA0 655 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 RBM24Q9BX46 236 aaKnown RBP3.19□□□□□ -1.9
SSB-210ENST00000474273 LRRCC1Q9C099 1032 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 C10orf88Q9H8K7 445 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 IARS2Q9NSE4 1012 aaKnown RBP3.19□□□□□ -1.9
SSB-210ENST00000474273 ANKEF1Q9NU02 776 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 PILRAQ9UKJ1 303 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 AGTPBP1Q9UPW5 1226 aa3.19□□□□□ -1.9
SSB-210ENST00000474273 TRAV18A0A075B6X5 111 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 TCP10L2B9ZVM9 353 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 H3BMM5 538 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 UBE2CO00762 179 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 P4HA2O15460 535 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 TCF4P15884 667 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 FEN1P39748 380 aaKnown RBP3.18□□□□□ -1.9
SSB-210ENST00000474273 RAD52P43351 418 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 CDX1P47902 265 aaPredicted RBP3.18□□□□□ -1.9
SSB-210ENST00000474273 PPP5CP53041 499 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 BTG1P62324 171 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 MLF2Q15773 248 aaPredicted RBP3.18□□□□□ -1.9
SSB-210ENST00000474273 TCP11X2Q5H9J9 407 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 LRRC73Q5JTD7 316 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 C9orf66Q5T8R8 295 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 MOXD1Q6UVY6 613 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 BAIAP2L2Q6UXY1 529 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 C11orf57Q6ZUT1 292 aaPredicted RBP3.18□□□□□ -1.9
SSB-210ENST00000474273 TMUB2Q71RG4 321 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 CHST3Q7LGC8 479 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 KRT74Q7RTS7 529 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 FAM219AQ8IW50 185 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 ZBED8Q8IZ13 594 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 ABCA7Q8IZY2 2146 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 RTL3Q8N8U3 475 aaKnown RBP3.18□□□□□ -1.9
SSB-210ENST00000474273 GRK7Q8WTQ7 553 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 MRPS27Q92552 414 aaKnown RBP3.18□□□□□ -1.9
SSB-210ENST00000474273 CENPOQ9BU64 300 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 STRADBQ9C0K7 418 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 RPF1Q9H9Y2 349 aaKnown RBP3.18□□□□□ -1.9
SSB-210ENST00000474273 LIPGQ9Y5X9 500 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 AUP1Q9Y679 476 aa3.18□□□□□ -1.9
SSB-210ENST00000474273 A8MXE2 369 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 ZNF749O43361 778 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 TXNL1O43396 289 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 ZNF354AO60765 605 aaPredicted RBP3.17□□□□□ -1.9
SSB-210ENST00000474273 PENKP01210 267 aaPredicted RBP3.17□□□□□ -1.9
SSB-210ENST00000474273 MT-ND2P03891 347 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 DUX4L4P0CJ87 422 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 SSTR1P30872 391 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 ACY1Q03154 408 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 GCKRQ14397 625 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 COG2Q14746 738 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 SIX1Q15475 284 aaPredicted RBP3.17□□□□□ -1.9
SSB-210ENST00000474273 TAZQ16635 292 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 ZNF542PQ5EBM4 170 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 TRMT11Q7Z4G4 463 aaKnown RBP3.17□□□□□ -1.9
SSB-210ENST00000474273 COX8CQ7Z4L0 72 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 APCDD1Q8J025 514 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 TEX26Q8N6G2 289 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 AGAP11Q8TF27 550 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 TAAR6Q96RI8 345 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 NAA11Q9BSU3 229 aaPredicted RBP3.17□□□□□ -1.9
SSB-210ENST00000474273 ALKBH7Q9BT30 221 aaPredicted RBP3.17□□□□□ -1.9
SSB-210ENST00000474273 RABEP2Q9H5N1 569 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 MOB1AQ9H8S9 216 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 C3orf14Q9HBI5 128 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 ZNF581Q9P0T4 197 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 C5AR2Q9P296 337 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 SNX7Q9UNH6 387 aa3.17□□□□□ -1.9
SSB-210ENST00000474273 RUVBL2Q9Y230 463 aaKnown RBP3.17□□□□□ -1.9
SSB-210ENST00000474273 KAT6BQ8WYB5 2073 aa3.16□□□□□ -1.9
SSB-210ENST00000474273 TRGV8A0A0C4DH27 118 aa3.16□□□□□ -1.9
SSB-210ENST00000474273 RPL37AP8A6NKH3 93 aa3.16□□□□□ -1.9
SSB-210ENST00000474273 E5RGE8 158 aa3.16□□□□□ -1.9
SSB-210ENST00000474273 NPIPA3F8WFD2 350 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms