RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 NCF1P14598 390 aaPredicted RBP14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 AHRP35869 848 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 AGTR2P50052 363 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 TNFSF10P50591 281 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 CDKL1Q00532 357 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 ZNF33BQ06732 778 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 USP10Q14694 798 aaKnown RBP14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 ABRAXAS2Q15018 415 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 RBBP5Q15291 538 aaKnown RBP14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 ABHD17BQ5VST6 288 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 SYT10Q6XYQ8 523 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 ABHD13Q7L211 337 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 CTAGE6Q86UF2 777 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 SPATA6LQ8N4H0 392 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 ANKRD53Q8N9V6 530 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 NT5CQ8TCD5 201 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 FAR1Q8WVX9 515 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 ANKRD7Q92527 254 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 HAS2Q92819 552 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 TSLPQ969D9 159 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 MCMBPQ9BTE3 642 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 POPDC3Q9HBV1 291 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 LANCL2Q9NS86 450 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 KCNE2Q9Y6J6 123 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 CACNA1DQ01668 2161 aa14.81□□□□□ -0.04
CCDC88B-205ENST00000472524 LRBAP50851 2863 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 TRAV17A0A0B4J275 112 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 TCRBV9S1A1TA0A576 114 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 ENO4A6NNW6 628 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 LRRTM2O43300 516 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 CHST10O43529 356 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 DNAJB6O75190 326 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 FHP07954 510 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 GDF5P43026 501 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 HNMTP50135 292 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 PLTPP55058 493 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 RAB8AP61006 207 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 SKP1P63208 163 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 POU4F1Q01851 419 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 RHAGQ02094 409 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 ACTN3Q08043 901 aaPredicted RBP14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 CBLBQ13191 982 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 NSDHLQ15738 373 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 SFT2D3Q587I9 215 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 C1QL3Q5VWW1 255 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 FCRLBQ6BAA4 426 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 PLAG1Q6DJT9 500 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 PAPD4Q6PIY7 484 aaKnown RBP14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 CCDC25Q86WR0 208 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 CTAGE3PQ8IX95 158 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 UTP15Q8TED0 518 aaKnown RBP14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 RHBDF1Q96CC6 855 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 TSPAN17Q96FV3 270 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 OR1F2PQ96R84 312 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 RBBP8Q99708 897 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 CPNE1Q99829 537 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 DERL2Q9GZP9 239 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 KCNK13Q9HB14 408 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 TEKT2Q9UIF3 430 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 OSGIN2Q9Y236 505 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 UTP11Q9Y3A2 253 aaKnown RBP14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 CROCCQ5TZA2 2017 aa14.8□□□□□ -0.04
CCDC88B-205ENST00000472524 URADA6NGE7 173 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 B4GALT2O60909 372 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 CCDC166P0CW27 439 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 IL10P22301 178 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 GP5P40197 560 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 TGFBIQ15582 683 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 FBXO48Q5FWF7 155 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 TOR1AIP1Q5JTV8 583 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 RPUSD3Q6P087 351 aaKnown RBP14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 C3orf62Q6ZUJ4 267 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 TICAM1Q8IUC6 712 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 BCORP1Q8N888 145 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 PLPP5Q8NEB5 264 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 TRPV3Q8NET8 790 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 TBC1D20Q96BZ9 403 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 SLC6A16Q9GZN6 736 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 RAB17Q9H0T7 212 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 RHBGQ9H310 441 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 KLHL31Q9H511 634 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 OLAHQ9NV23 265 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 STMN3Q9NZ72 180 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 WWOXQ9NZC7 414 aa14.79□□□□□ -0.04
CCDC88B-205ENST00000472524 OR5H15A6NDH6 313 aa14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 FAM159BA6NKW6 160 aa14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 MAGEB17A8MXT2 336 aa14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 C4orf51C9J302 202 aa14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 WISP3O95389 354 aaPredicted RBP14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 EDN3P14138 238 aa14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 STMN1P16949 149 aa14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 GNAZP19086 355 aa14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 JAK1P23458 1154 aa14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 SLC6A12P48065 614 aa14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 ST13P50502 369 aaKnown RBP14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 OR4D2P58180 307 aa14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 GPX6P59796 221 aa14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 ETF1P62495 437 aaKnown RBP14.78□□□□□ -0.04
CCDC88B-205ENST00000472524 HYAL2Q12891 473 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms