RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SEC16BQ96JE7 1060 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 MARK4Q96L34 752 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 OR6C1Q96RD1 312 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 SIKE1Q9BRV8 207 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 REXO4Q9GZR2 422 aaKnown RBP18.28■□□□□ 0.52
PSPC1-203ENST00000471658 TCF7L2Q9NQB0 619 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 PFDN4Q9NQP4 134 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 IRAK4Q9NWZ3 460 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 SIDT1Q9NXL6 827 aaKnown RBP18.28■□□□□ 0.52
PSPC1-203ENST00000471658 PPT2Q9UMR5 302 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 APOBEC2Q9Y235 224 aaKnown RBP18.28■□□□□ 0.52
PSPC1-203ENST00000471658 ADAMTS20P59510 1910 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 EFCAB7A8K855 629 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 E9PBE3 544 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 PLPP1O14494 284 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 NDUFAB1O14561 156 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 KLHL41O60662 606 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 CSO75390 466 aaKnown RBP18.27■□□□□ 0.52
PSPC1-203ENST00000471658 RSL1D1O76021 490 aaKnown RBP18.27■□□□□ 0.52
PSPC1-203ENST00000471658 SLC35G6P0C7Q6 338 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 CCKBRP32239 447 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 CSTF2P33240 577 aaKnown RBP eCLIP18.27■□□□□ 0.52
PSPC1-203ENST00000471658 FOXM1Q08050 763 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 RGS1Q08116 209 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 CUL3Q13618 768 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 ATP6AP1LQ52LC2 224 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 ACAD11Q709F0 780 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 ALYREFQ86V81 257 aaKnown RBP18.27■□□□□ 0.52
PSPC1-203ENST00000471658 DTWD1Q8N5C7 304 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 C1orf52Q8N6N3 182 aaKnown RBP18.27■□□□□ 0.52
PSPC1-203ENST00000471658 PPP3R2Q96LZ3 170 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 C1orf50Q9BV19 199 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 APMAPQ9HDC9 416 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 LHX9Q9NQ69 397 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 C1orf109Q9NX04 203 aa18.27■□□□□ 0.52
PSPC1-203ENST00000471658 ERI3O43414 337 aaKnown RBP18.27■□□□□ 0.51
PSPC1-203ENST00000471658 GBAP04062 536 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 ZNF888P0CJ79 500 aaPredicted RBP18.27■□□□□ 0.51
PSPC1-203ENST00000471658 LBPP18428 481 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 PRPH2P23942 346 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 RPL38P63173 70 aaKnown RBP18.27■□□□□ 0.51
PSPC1-203ENST00000471658 ZFAND4Q86XD8 727 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 MARCH9Q86YJ5 346 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 HOMEZQ8IX15 550 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 METTL4Q8N3J2 472 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 ARHGEF39Q8N4T4 335 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 ZNF655Q8N720 491 aaPredicted RBP18.27■□□□□ 0.51
PSPC1-203ENST00000471658 FNDC5Q8NAU1 212 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 AGBL5Q8NDL9 886 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 CEP70Q8NHQ1 597 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 UTP15Q8TED0 518 aaKnown RBP18.27■□□□□ 0.51
PSPC1-203ENST00000471658 C17orf62Q9BQA9 187 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 CCDC28BQ9BUN5 200 aa18.27■□□□□ 0.51
PSPC1-203ENST00000471658 ZNF717Q9BY31 904 aaPredicted RBP18.27■□□□□ 0.51
PSPC1-203ENST00000471658 POLR3HQ9Y535 204 aaPredicted RBP18.27■□□□□ 0.51
PSPC1-203ENST00000471658 PMS2P1A4D2B8 440 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 NPIPB8E9PQR5 432 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 VPS4BO75351 444 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 OR2B3O76000 313 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 KCNK5O95279 499 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 ALDOCP09972 364 aaKnown RBP18.26■□□□□ 0.51
PSPC1-203ENST00000471658 RAP1GDS1P52306 607 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 STXBP1P61764 594 aaKnown RBP18.26■□□□□ 0.51
PSPC1-203ENST00000471658 RAE1P78406 368 aaKnown RBP18.26■□□□□ 0.51
PSPC1-203ENST00000471658 ACY1Q03154 408 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 TMEM214Q6NUQ4 689 aaKnown RBP18.26■□□□□ 0.51
PSPC1-203ENST00000471658 ABHD17CQ6PCB6 329 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 PRSS41Q7RTY9 318 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 BMPERQ8N8U9 685 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 RGMAQ96B86 450 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 TEFMQ96QE5 360 aaKnown RBP18.26■□□□□ 0.51
PSPC1-203ENST00000471658 EBPLQ9BY08 206 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 NMRK1Q9NWW6 199 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 HEY2Q9UBP5 337 aa18.26■□□□□ 0.51
PSPC1-203ENST00000471658 SPTBP11277 2137 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 EEDO75530 441 aaKnown RBP18.25■□□□□ 0.51
PSPC1-203ENST00000471658 KLHL18O94889 574 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 KLK1P06870 262 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 MSL3P1P0C860 447 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 SMIM10L1P0DMW3 83 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 BSGP35613 385 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 DIO3P55073 304 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 ITGA1P56199 1179 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 ACSM2AQ08AH3 577 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 TMEM35AQ53FP2 167 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 TCTE1Q5JU00 501 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 GKAP1Q5VSY0 366 aaPredicted RBP18.25■□□□□ 0.51
PSPC1-203ENST00000471658 ACSM2BQ68CK6 577 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 ZNF793Q6ZN11 406 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 COMMD6Q7Z4G1 85 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 SHISA5Q8N114 240 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 OR2L5Q8NG80 312 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 C11orf24Q96F05 449 aaPredicted RBP18.25■□□□□ 0.51
PSPC1-203ENST00000471658 SMIM10Q96HG1 83 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 SLC45A3Q96JT2 553 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 C10orf90Q96M02 699 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 CATSPER2Q96P56 530 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 CTRCQ99895 268 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 NLNQ9BYT8 704 aa18.25■□□□□ 0.51
PSPC1-203ENST00000471658 PRDM7Q9NQW5 492 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms