RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 DMRT3Q9NQL9 472 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 CMTM6Q9NX76 183 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 TAC3Q9UHF0 121 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 SH2B3Q9UQQ2 575 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 CEP295Q9C0D2 2601 aa16.75■□□□□ 0.27
HSPG2-208ENST00000471322 LMO7DNF2Z398 122 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 NME4O00746 187 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 BAG2O95816 211 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 ANXA6P08133 673 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 VHLP40337 213 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 HNRNPFP52597 415 aaKnown RBP16.74■□□□□ 0.27
HSPG2-208ENST00000471322 SPANXN4Q5MJ08 99 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 NANOGP8Q6NSW7 305 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 SLC30A9Q6PML9 568 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 RIMKLAQ8IXN7 391 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 C2orf73Q8N5S3 287 aaPredicted RBP16.74■□□□□ 0.27
HSPG2-208ENST00000471322 OR4K1Q8NGD4 311 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 OR8J3Q8NGG0 315 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 DNAJB14Q8TBM8 379 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 PYDC1Q8WXC3 89 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 ZUFSPQ96AP4 578 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 CGREF1Q99674 301 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 CDC6Q99741 560 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 RHBGQ9H310 441 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 NANOGQ9H9S0 305 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 NLGN3Q9NZ94 848 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 AHSPQ9NZD4 102 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 PCDHB11Q9Y5F2 797 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 ERN1O75460 977 aaKnown RBP16.74■□□□□ 0.27
HSPG2-208ENST00000471322 ALPPL2P10696 532 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 TACR1P25103 407 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 MSX2P35548 267 aaPredicted RBP16.74■□□□□ 0.27
HSPG2-208ENST00000471322 ABATP80404 500 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 SLCO6A1Q86UG4 719 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 DHFR2Q86XF0 187 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 RNF175Q8N4F7 328 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 LMNTD1Q8N9Z9 388 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 FAM46DQ8NEK8 389 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 CLHC1Q8NHS4 586 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 GTF2H4Q92759 462 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 ITCHQ96J02 903 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 LRGUKQ96M69 825 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 TMEM74Q96NL1 305 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 ACAT2Q9BWD1 397 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 TOR4AQ9NXH8 423 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 TBC1D29Q9UFV1 150 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 CSNK1G3Q9Y6M4 447 aa16.74■□□□□ 0.27
HSPG2-208ENST00000471322 A0A1W2PPV9 198 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 OR52A4PA6NMU1 304 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 TNFSF14O43557 240 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 CCNDBP1O95273 360 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 FTH1P19P0C7X4 201 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 SESN3P58005 492 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 PRDX1Q06830 199 aaKnown RBP16.73■□□□□ 0.27
HSPG2-208ENST00000471322 ILF3Q12906 894 aaKnown RBP eCLIP16.73■□□□□ 0.27
HSPG2-208ENST00000471322 PROX2Q3B8N5 592 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 ICE2Q659A1 982 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 LRRC74BQ6ZQY2 392 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 GPR180Q86V85 440 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 SPATA24Q86W54 205 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 NRROSQ86YC3 692 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 C1orf52Q8N6N3 182 aaKnown RBP16.73■□□□□ 0.27
HSPG2-208ENST00000471322 LINC01555Q8NAE3 123 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 GOLM1Q8NBJ4 401 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 FAM156AQ8NDB6 213 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 OR52E1Q8NGJ3 308 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 RSRC1Q96IZ7 334 aaKnown RBP16.73■□□□□ 0.27
HSPG2-208ENST00000471322 PRPF18Q99633 342 aaKnown RBP16.73■□□□□ 0.27
HSPG2-208ENST00000471322 MAN2B2Q9Y2E5 1009 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 AKAP13Q12802 2813 aa16.73■□□□□ 0.27
HSPG2-208ENST00000471322 MED19A0JLT2 244 aaPredicted RBP16.72■□□□□ 0.27
HSPG2-208ENST00000471322 ANKDD1BA6NHY2 528 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 B4DGG1 531 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 ETHE1O95571 254 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 ANXA4P09525 319 aaPredicted RBP16.72■□□□□ 0.27
HSPG2-208ENST00000471322 HRH2P25021 359 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 TIA1P31483 386 aaKnown RBP eCLIP16.72■□□□□ 0.27
HSPG2-208ENST00000471322 SHMT2P34897 504 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 ACTR1BP42025 376 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 KIR3DL1P43629 444 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 ERFP50548 548 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 ACTR1AP61163 376 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 DAB2P98082 770 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 REEP5Q00765 189 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 RBBP5Q15291 538 aaKnown RBP16.72■□□□□ 0.27
HSPG2-208ENST00000471322 C6orf10Q5SRN2 563 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 GKN2Q86XP6 184 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 TTLQ8NG68 377 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 ZFPM2Q8WW38 1151 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 CXorf40BQ96DE9 158 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 KCTD14Q9BQ13 255 aaPredicted RBP16.72■□□□□ 0.27
HSPG2-208ENST00000471322 DUSP23Q9BVJ7 150 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 PCDHAC1Q9H158 963 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 ALG2Q9H553 416 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 OR6C2Q9NZP2 312 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 C6orf203Q9P0P8 240 aaPredicted RBP16.72■□□□□ 0.27
HSPG2-208ENST00000471322 SLAMF8Q9P0V8 285 aa16.72■□□□□ 0.27
HSPG2-208ENST00000471322 A0A096LPI6 279 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 LY6G6EA0A0G2JKS1 128 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 AQP12BA6NM10 295 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms