RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 SMIM10Q96HG1 83 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 LMF1Q96S06 567 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 CYTH2Q99418 400 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 BARD1Q99728 777 aaKnown RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 TUBB6Q9BUF5 446 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 FUT8Q9BYC5 575 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 PITHD1Q9GZP4 211 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 AICDAQ9GZX7 198 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 ILKAPQ9H0C8 392 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 EHD1Q9H4M9 534 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 EPS8L2Q9H6S3 715 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 CNOT10Q9H9A5 744 aaKnown RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 CLK4Q9HAZ1 481 aaKnown RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 WWOXQ9NZC7 414 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 DMGDHQ9UI17 866 aaKnown RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 PTBP2Q9UKA9 531 aaKnown RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 VPS4AQ9UN37 437 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 HECTD1Q9ULT8 2610 aa13.27□□□□□ -0.29
COMMD3-208ENST00000470045 RP1L1Q8IWN7 2480 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-208ENST00000470045 HMX2A2RU54 273 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 PRAMEF4O60810 478 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 TUBB4AP04350 444 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 SERPINA6P08185 405 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 CELA2AP08217 269 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 ZNF888P0CJ79 500 aaPredicted RBP13.26□□□□□ -0.29
COMMD3-208ENST00000470045 GSTM2P28161 218 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 CRABP2P29373 138 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 AGTR2P50052 363 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 AP2B1P63010 937 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 E2F2Q14209 437 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 SLMAPQ14BN4 828 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 MINDY4Q4G0A6 757 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 UBAP2Q5T6F2 1119 aaKnown RBP13.26□□□□□ -0.29
COMMD3-208ENST00000470045 PRAMEF9Q5VWM5 478 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 CPEB2Q7Z5Q1 589 aaKnown RBP13.26□□□□□ -0.29
COMMD3-208ENST00000470045 ANKRD37Q7Z713 158 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 ISCA2Q86U28 154 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.26□□□□□ -0.29
COMMD3-208ENST00000470045 PLPP5Q8NEB5 264 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 BRIX1Q8TDN6 353 aaKnown RBP13.26□□□□□ -0.29
COMMD3-208ENST00000470045 METTL21AQ8WXB1 218 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 WDR34Q96EX3 536 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 PEX11GQ96HA9 241 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 SEC16BQ96JE7 1060 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 ATOH8Q96SQ7 321 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 CAPS2Q9BXY5 557 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 ACSS3Q9H6R3 686 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 NT5DC2Q9H857 520 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 DNAJC11Q9NVH1 559 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 NINJ2Q9NZG7 142 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 C19orf25Q9UFG5 118 aaPredicted RBP13.26□□□□□ -0.29
COMMD3-208ENST00000470045 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 DOPEY2Q9Y3R5 2298 aa13.26□□□□□ -0.29
COMMD3-208ENST00000470045 OR2W5A6NFC9 320 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 URADA6NGE7 173 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 MAGEB17A8MXT2 336 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 TCP11X1B4DZS4 312 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 CHST10O43529 356 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 DNAJB6O75190 326 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 STK16O75716 305 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 B3GALT4O96024 378 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 SERPIND1P05546 499 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 LTA4HP09960 611 aaKnown RBP13.25□□□□□ -0.29
COMMD3-208ENST00000470045 ITGAMP11215 1152 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 ICAM2P13598 275 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 EPORP19235 508 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 TFEBP19484 476 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 GNLYP22749 145 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 ECHS1P30084 290 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 TSFMP43897 325 aaKnown RBP13.25□□□□□ -0.29
COMMD3-208ENST00000470045 KCNC1P48547 511 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 HSPA7P48741 367 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 UBAP2LQ14157 1087 aaKnown RBP13.25□□□□□ -0.29
COMMD3-208ENST00000470045 SLBPQ14493 270 aaKnown RBP eCLIP13.25□□□□□ -0.29
COMMD3-208ENST00000470045 RBBP5Q15291 538 aaKnown RBP13.25□□□□□ -0.29
COMMD3-208ENST00000470045 MFSD4BQ5TF39 518 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 B3GNTL1Q67FW5 361 aaPredicted RBP13.25□□□□□ -0.29
COMMD3-208ENST00000470045 PLAG1Q6DJT9 500 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 TMIGD1Q6UXZ0 262 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 CEP128Q6ZU80 1094 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 CCDC91Q7Z6B0 441 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 CENPLQ8N0S6 344 aaPredicted RBP13.25□□□□□ -0.29
COMMD3-208ENST00000470045 MNS1Q8NEH6 495 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 TTLQ8NG68 377 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 STAG3L4Q8TBR4 150 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 UBTD2Q8WUN7 234 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 ZNF592Q92610 1267 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 GAL3ST3Q96A11 431 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 ESAMQ96AP7 390 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 TBC1D20Q96BZ9 403 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 C19orf60Q96EN9 201 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 SLC29A3Q9BZD2 475 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 ALG9Q9H6U8 611 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 NMRAL1Q9HBL8 299 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 IGSF5Q9NSI5 407 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 ASF1BQ9NVP2 202 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 NUDT4Q9NZJ9 180 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 CD274Q9NZQ7 290 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 RNF112Q9ULX5 631 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 NTNG1Q9Y2I2 539 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms