RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SP1P08047 785 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 ENO2P09104 434 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-210ENST00000469897 CD46P15529 392 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 EEF1DP29692 281 aaKnown RBP12.47□□□□□ -0.41
CPSF4-210ENST00000469897 SLC26A5P58743 744 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 RGS1Q08116 209 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 ART3Q13508 389 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 C3AR1Q16581 482 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 ZNF468Q5VIY5 522 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-210ENST00000469897 SLC25A25Q6KCM7 469 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 GALNTL5Q7Z4T8 443 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-210ENST00000469897 STRA8Q7Z7C7 330 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 THOC6Q86W42 341 aaKnown RBP12.47□□□□□ -0.41
CPSF4-210ENST00000469897 RPS19BP1Q86WX3 136 aaKnown RBP12.47□□□□□ -0.41
CPSF4-210ENST00000469897 KIF2BQ8N4N8 673 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 SLC5A8Q8N695 610 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 ANKRD53Q8N9V6 530 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 ELP5Q8TE02 316 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 SLCO2A1Q92959 643 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 SCMH1Q96GD3 660 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 CAPZA3Q96KX2 299 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 TSPAN10Q9H1Z9 355 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-210ENST00000469897 RHBGQ9H310 441 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 NPIPA1Q9UND3 350 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 DYRK1BQ9Y463 629 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 PCDHGB6Q9Y5F9 930 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 TEX264Q9Y6I9 313 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 DOPEY1Q5JWR5 2465 aa12.47□□□□□ -0.41
CPSF4-210ENST00000469897 ZNHIT1O43257 154 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 NEURL1O76050 574 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 SMIM10L1P0DMW3 83 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 MAOAP21397 527 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 JAK1P23458 1154 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 TNFRSF8P28908 595 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 TAS2R50P59544 299 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 ALDH6A1Q02252 535 aaKnown RBP12.46□□□□□ -0.41
CPSF4-210ENST00000469897 HYAL2Q12891 473 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 MORF4L2Q15014 288 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 MAPKAPK3Q16644 382 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.46□□□□□ -0.41
CPSF4-210ENST00000469897 KRTCAP3Q53RY4 240 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 NXPE4Q6UWF7 544 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 SBSNQ6UWP8 590 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 ABHD13Q7L211 337 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 MCEMP1Q8IX19 187 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 TRPV3Q8NET8 790 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 ADAMTS18Q8TE60 1221 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 SMIM10Q96HG1 83 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 NECTIN3Q9NQS3 549 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 LRFN1Q9P244 771 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 CORO1CQ9ULV4 474 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-210ENST00000469897 PSAT1Q9Y617 370 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 KCNE2Q9Y6J6 123 aa12.46□□□□□ -0.41
CPSF4-210ENST00000469897 ASNA1O43681 348 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 ESRRAP11474 423 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-210ENST00000469897 TCP1P17987 556 aaKnown RBP12.45□□□□□ -0.42
CPSF4-210ENST00000469897 HTR1EP28566 365 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 TPP2P29144 1249 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-210ENST00000469897 AHRP35869 848 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 GDF5P43026 501 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 ITGA8P53708 1063 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 CASP6P55212 293 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 BTN3A2P78410 334 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 DR1Q01658 176 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 ZNF460Q14592 562 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 NAA30Q147X3 362 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-210ENST00000469897 PPP1R3AQ16821 1122 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 C18orf21Q32NC0 220 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-210ENST00000469897 NIPAL1Q6NVV3 410 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 MTFR2Q6P444 385 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 SYDE1Q6ZW31 735 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-210ENST00000469897 TMPRSS11BQ86T26 416 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 SPPL2CQ8IUH8 684 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 ZNF808Q8N4W9 903 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-210ENST00000469897 NKAPQ8N5F7 415 aaKnown RBP12.45□□□□□ -0.42
CPSF4-210ENST00000469897 HORMAD2Q8N7B1 307 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 TMEM178AQ8NBL3 297 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 THAP3Q8WTV1 239 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-210ENST00000469897 ANKRD49Q8WVL7 239 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 LRRC39Q96DD0 335 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 GPR137Q96N19 417 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 EGFL8Q99944 293 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 AIF1LQ9BQI0 150 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 TRIM31Q9BZY9 425 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 SLC6A16Q9GZN6 736 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 PELI2Q9HAT8 420 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 ZFATQ9P243 1243 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 TINAGQ9UJW2 476 aa12.45□□□□□ -0.42
CPSF4-210ENST00000469897 KLF2Q9Y5W3 355 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-210ENST00000469897 ASPDHA6ND91 283 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 NPEPPSL1A6NEC2 478 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 URADA6NGE7 173 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 C4orf51C9J302 202 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 PSMD12O00232 456 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-210ENST00000469897 H2AFYO75367 372 aaKnown RBP12.44□□□□□ -0.42
CPSF4-210ENST00000469897 PIAS1O75925 651 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 SNRPB2P08579 225 aaKnown RBP12.44□□□□□ -0.42
CPSF4-210ENST00000469897 ZNF37AP17032 561 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-210ENST00000469897 ARL4CP56559 192 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms