RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ADPRMQ3LIE5 342 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 SH2D4BQ5SQS7 431 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 TMEM164Q5U3C3 297 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 KANK2Q63ZY3 851 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 ZNF385CQ66K41 422 aaPredicted RBP14.06□□□□□ -0.16
COL9A3-209ENST00000469852 RHBDD2Q6NTF9 364 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 UBE3DQ7Z6J8 389 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 PDSS2Q86YH6 399 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 ZNF781Q8N8C0 355 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 GALNT6Q8NCL4 622 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 TTLQ8NG68 377 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 ZNF75CPQ92670 426 aaPredicted RBP14.06□□□□□ -0.16
COL9A3-209ENST00000469852 CLIP3Q96DZ5 547 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 NDC1Q9BTX1 674 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 OR51B5Q9H339 312 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 MANSC1Q9H8J5 431 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 CELSR3Q9NYQ7 3312 aa14.06□□□□□ -0.16
COL9A3-209ENST00000469852 FAM208BQ5VWN6 2430 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 AHCTF1Q8WYP5 2266 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 A0A0A6YYC8 382 aaPredicted RBP14.05□□□□□ -0.16
COL9A3-209ENST00000469852 TMEM8BA6NDV4 472 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 I3L1I5 382 aaPredicted RBP14.05□□□□□ -0.16
COL9A3-209ENST00000469852 DSCR3O14972 297 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 AZIN1O14977 448 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 DNAJB6O75190 326 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 SMIM10L1P0DMW3 83 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 GSTM2P28161 218 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 PIK3CBP42338 1070 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 RAB8AP61006 207 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 RGS1Q08116 209 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 IFT88Q13099 833 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 TBC1D25Q3MII6 688 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 UGT3A2Q3SY77 523 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 FAM199XQ6PEV8 388 aaPredicted RBP14.05□□□□□ -0.16
COL9A3-209ENST00000469852 AFAP1L2Q8N4X5 818 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 OR9A4Q8NGU2 314 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 UTP15Q8TED0 518 aaKnown RBP14.05□□□□□ -0.16
COL9A3-209ENST00000469852 CKAP2Q8WWK9 683 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 SELENOMQ8WWX9 145 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 REPS1Q96D71 796 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 MS4A6EQ96DS6 147 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 SMIM10Q96HG1 83 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 SEC16BQ96JE7 1060 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 MAGEB10Q96LZ2 347 aaPredicted RBP14.05□□□□□ -0.16
COL9A3-209ENST00000469852 GBP5Q96PP8 586 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 SORBS1Q9BX66 1292 aaKnown RBP14.05□□□□□ -0.16
COL9A3-209ENST00000469852 B3GNT4Q9C0J1 378 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 TUBB1Q9H4B7 451 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 ELOVL6Q9H5J4 265 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 EML4Q9HC35 981 aaKnown RBP14.05□□□□□ -0.16
COL9A3-209ENST00000469852 SLC22A11Q9NSA0 550 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 NDOR1Q9UHB4 597 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 SNX6Q9UNH7 406 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 SEC16AO15027 2179 aa14.05□□□□□ -0.16
COL9A3-209ENST00000469852 A0A1B0GX78 115 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 ZNF860A6NHJ4 632 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 FOXE1O00358 373 aaPredicted RBP14.04□□□□□ -0.16
COL9A3-209ENST00000469852 RTCAO00442 366 aaKnown RBP14.04□□□□□ -0.16
COL9A3-209ENST00000469852 TXNDC9O14530 226 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 TLX3O43711 291 aaPredicted RBP14.04□□□□□ -0.16
COL9A3-209ENST00000469852 CAPNS1P04632 268 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 JUNP05412 331 aaKnown RBP14.04□□□□□ -0.16
COL9A3-209ENST00000469852 FGF4P08620 206 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 UROSP10746 265 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 ALAS2P22557 587 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 OR1D4P47884 311 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 ARSFP54793 590 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 EMP3P54852 163 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 OCRLQ01968 901 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 SLC9A5Q14940 896 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 TGIF1Q15583 401 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 MUM1Q2TAK8 710 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 FAM214AQ32MH5 1076 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 DEPDC1Q5TB30 811 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 GARNL3Q5VVW2 1013 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 KHDRBS2Q5VWX1 349 aaKnown RBP14.04□□□□□ -0.16
COL9A3-209ENST00000469852 TMEM151BQ8IW70 566 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 DSELQ8IZU8 1212 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 AMER3Q8N944 861 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 RAB3IL1Q8TBN0 382 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 DYDC1Q8WWB3 177 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 CMTM7Q96FZ5 175 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 NLNQ9BYT8 704 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 ACPTQ9BZG2 426 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 SLC7A5P2Q9GIP4 190 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 REXO4Q9GZR2 422 aaKnown RBP14.04□□□□□ -0.16
COL9A3-209ENST00000469852 PRM3Q9NNZ6 103 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 LHX9Q9NQ69 397 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 THSD1Q9NS62 852 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 PNPOQ9NVS9 261 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 ACSL6Q9UKU0 697 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 SRPK3Q9UPE1 567 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 TRAF6Q9Y4K3 522 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 DNAJC15Q9Y5T4 150 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 MAU2Q9Y6X3 613 aa14.04□□□□□ -0.16
COL9A3-209ENST00000469852 SRRM3A6NNA2 597 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-209ENST00000469852 SGK494L7N484 410 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 MEN1O00255 615 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 PLPP1O14494 284 aa14.03□□□□□ -0.16
COL9A3-209ENST00000469852 KLF11O14901 512 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms