RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SLC26A5P58743 744 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 REEP5Q00765 189 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 HYAL2Q12891 473 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 MEP1AQ16819 746 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 SP5Q6BEB4 398 aaPredicted RBP23■■□□□ 1.27
PTCH1-210ENST00000468211 SPINK14Q6IE38 97 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 CREG2Q8IUH2 290 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 KIF2BQ8N4N8 673 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 UTP15Q8TED0 518 aaKnown RBP23■■□□□ 1.27
PTCH1-210ENST00000468211 ATL1Q8WXF7 558 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 LPAR4Q99677 370 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 AICDAQ9GZX7 198 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 KLHL31Q9H511 634 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 COPG2Q9UBF2 871 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 APCP25054 2843 aa23■■□□□ 1.27
PTCH1-210ENST00000468211 CSMD1Q96PZ7 3565 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 GTF3C1Q12789 2109 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 ARHGAP10A1A4S6 786 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 PABPN1LA6NDY0 278 aaKnown RBP22.99■■□□□ 1.27
PTCH1-210ENST00000468211 NPEPPSL1A6NEC2 478 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 B4GALT2O60909 372 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 HNF4AP41235 474 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 RAB8AP61006 207 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 BTG2P78543 158 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 DR1Q01658 176 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 FASTKD3Q14CZ7 662 aaKnown RBP22.99■■□□□ 1.27
PTCH1-210ENST00000468211 OR1C1Q15619 314 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 THOC6Q86W42 341 aaKnown RBP22.99■■□□□ 1.27
PTCH1-210ENST00000468211 ITLN2Q8WWU7 325 aaPredicted RBP22.99■■□□□ 1.27
PTCH1-210ENST00000468211 CCDC120Q96HB5 630 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 UTP23Q9BRU9 249 aaKnown RBP22.99■■□□□ 1.27
PTCH1-210ENST00000468211 SH3BGRL2Q9UJC5 107 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 ENTPD4Q9Y227 616 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 SLC22A14Q9Y267 594 aa22.99■■□□□ 1.27
PTCH1-210ENST00000468211 PRSS44E7EML9 344 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 CCL21O00585 134 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 TTI1O43156 1089 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 MYBL2P10244 700 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 GRNP28799 593 aaKnown RBP22.98■■□□□ 1.27
PTCH1-210ENST00000468211 AHRP35869 848 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 CA7P43166 264 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 TAS2R39P59534 338 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 RGS1Q08116 209 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 C18orf21Q32NC0 220 aaPredicted RBP22.98■■□□□ 1.27
PTCH1-210ENST00000468211 ZNF468Q5VIY5 522 aaPredicted RBP22.98■■□□□ 1.27
PTCH1-210ENST00000468211 ZC3HC1Q86WB0 502 aaKnown RBP22.98■■□□□ 1.27
PTCH1-210ENST00000468211 SLC34A3Q8N130 599 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 ELP5Q8TE02 316 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 MARVELD3Q96A59 401 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 LRRC39Q96DD0 335 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 SCMH1Q96GD3 660 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 SLC6A16Q9GZN6 736 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 PCDHGB6Q9Y5F9 930 aa22.98■■□□□ 1.27
PTCH1-210ENST00000468211 NCOA6Q14686 2063 aaPredicted RBP22.97■■□□□ 1.27
PTCH1-210ENST00000468211 GABRR3A8MPY1 467 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 FAM227AF5H4B4 570 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 SEC31AO94979 1220 aaKnown RBP22.97■■□□□ 1.27
PTCH1-210ENST00000468211 SMIM10L1P0DMW3 83 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 MGAT5Q09328 741 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 FRG1Q14331 258 aaKnown RBP22.97■■□□□ 1.27
PTCH1-210ENST00000468211 NXPE4Q6UWF7 544 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 SYDE1Q6ZW31 735 aaPredicted RBP22.97■■□□□ 1.27
PTCH1-210ENST00000468211 TMPRSS11BQ86T26 416 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 ANKRD49Q8WVL7 239 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 SMIM10Q96HG1 83 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 PTCHD1Q96NR3 888 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 TRIM31Q9BZY9 425 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 UNKQ9C0B0 810 aaKnown RBP22.97■■□□□ 1.27
PTCH1-210ENST00000468211 TSPAN10Q9H1Z9 355 aaPredicted RBP22.97■■□□□ 1.27
PTCH1-210ENST00000468211 CDCP1Q9H5V8 836 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 PELI2Q9HAT8 420 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 ZFATQ9P243 1243 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 DYRK1BQ9Y463 629 aa22.97■■□□□ 1.27
PTCH1-210ENST00000468211 FAM95CA0A1B0GW59 222 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 PIAS1O75925 651 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 NEURL1O76050 574 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 MAOAP21397 527 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 ARL4CP56559 192 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 ABHD13Q7L211 337 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 CEP97Q8IW35 865 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 CYP4X1Q8N118 509 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 TBC1D19Q8N5T2 526 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 SLC5A8Q8N695 610 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 FBXO36Q8NEA4 188 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 CREB3L4Q8TEY5 395 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 MOCS1Q9NZB8 636 aa22.96■■□□□ 1.27
PTCH1-210ENST00000468211 HNRNPRO43390 633 aaKnown RBP22.95■■□□□ 1.26
PTCH1-210ENST00000468211 JAK1P23458 1154 aa22.95■■□□□ 1.26
PTCH1-210ENST00000468211 OC90Q02509 493 aaPredicted RBP22.95■■□□□ 1.26
PTCH1-210ENST00000468211 PDIA2Q13087 525 aaKnown RBP22.95■■□□□ 1.26
PTCH1-210ENST00000468211 RBBP5Q15291 538 aaKnown RBP22.95■■□□□ 1.26
PTCH1-210ENST00000468211 SRRM1Q8IYB3 904 aaKnown RBP22.95■■□□□ 1.26
PTCH1-210ENST00000468211 FRMD6Q96NE9 622 aa22.95■■□□□ 1.26
PTCH1-210ENST00000468211 AIF1LQ9BQI0 150 aa22.95■■□□□ 1.26
PTCH1-210ENST00000468211 RHBGQ9H310 441 aa22.95■■□□□ 1.26
PTCH1-210ENST00000468211 GRPEL1Q9HAV7 217 aa22.95■■□□□ 1.26
PTCH1-210ENST00000468211 NECTIN3Q9NQS3 549 aa22.95■■□□□ 1.26
PTCH1-210ENST00000468211 SMYD2Q9NRG4 433 aa22.95■■□□□ 1.26
PTCH1-210ENST00000468211 FBN2P35556 2912 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 IGKV3D-11A0A0A0MRZ8 115 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms