RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 A0A075B6Q4 140 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 A0A1W2PQ67 120 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 NT5C1B-RDH14C9J2C7 533 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 J3KTA2 159 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 ETHE1O95571 254 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 HIST1H2AGP0C0S8 130 aaPredicted RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 HIST1H2ADP20671 130 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 MVDP53602 400 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 RAE1P78406 368 aaKnown RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 STARD3Q14849 445 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 CYP27C1Q4G0S4 372 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 ATP13A5Q4VNC0 1218 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 ZMAT1Q5H9K5 638 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 COX20Q5RI15 118 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 ADNP2Q6IQ32 1131 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 ZNF852Q6ZMS4 543 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 CBARPQ8N350 705 aaPredicted RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 C11orf65Q8NCR3 313 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 HIST1H2AHQ96KK5 128 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 CEP19Q96LK0 163 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 HIST1H2AJQ99878 128 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 TSEN34Q9BSV6 310 aaKnown RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 H2AFJQ9BTM1 129 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 KLF16Q9BXK1 252 aaPredicted RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 BARHL1Q9BZE3 327 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 SMURF1Q9HCE7 757 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 DDX28Q9NUL7 540 aaKnown RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 HTTP42858 3142 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 C2orf78A6NCI8 922 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 CCRL2O00421 344 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 PCDH17O14917 1159 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 SH3BGRLO75368 114 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 CYP7B1O75881 506 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 SLITRK5O94991 958 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 C8GP07360 202 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 ABCB1P08183 1280 aaPredicted RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 CKBP12277 381 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 HNMTP50135 292 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 FUT10Q6P4F1 479 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 TMEM173Q86WV6 379 aaPredicted RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 APCDD1Q8J025 514 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 C9orf43Q8TAL5 461 aaPredicted RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 C19orf43Q9BQ61 176 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 SPATA6Q9NWH7 488 aaPredicted RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 TAS2R9Q9NYW1 312 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 KLHL42Q9P2K6 505 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 RUVBL1Q9Y265 456 aaKnown RBP12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 V9GYH0 126 aa12.49□□□□□ -0.41
PDZRN3-205ENST00000466780 SCO2O43819 266 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 C1SP09871 688 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 ETFAP13804 333 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 HMGA1P17096 107 aaKnown RBP12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 SLC11A1P49279 550 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 IRF8Q02556 426 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 ACSM2AQ08AH3 577 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 DMC1Q14565 340 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 PTGES3Q15185 160 aaKnown RBP12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 IFI44LQ53G44 452 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 CPTPQ5TA50 214 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 ACSM2BQ68CK6 577 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 CRTC1Q6UUV9 634 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 BBS7Q8IWZ6 715 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 NPAS3Q8IXF0 933 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 ASB15Q8WXK1 588 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 DMRTB1Q96MA1 342 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 OPALINQ96PE5 141 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 ZIC5Q96T25 663 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 AP1M2Q9Y6Q5 423 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 H3BM21 787 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 GFYI3L273 518 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 IDSP22304 550 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 TIE1P35590 1138 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 RPS19P39019 145 aaKnown RBP12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 SMARCB1Q12824 385 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 TEAD4Q15561 434 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 BAK1Q16611 211 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 TRAF7Q6Q0C0 670 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 ASCC1Q8N9N2 400 aaKnown RBP12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 FLCNQ8NFG4 579 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 GPR151Q8TDV0 419 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 CHTF18Q8WVB6 975 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 GTPBP3Q969Y2 492 aaKnown RBP12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 TMCO6Q96DC7 493 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 TRNT1Q96Q11 434 aaKnown RBP12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 HHATLQ9HCP6 504 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 TBC1D14Q9P2M4 693 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 CRNNQ9UBG3 495 aaPredicted RBP12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 OGDHLQ9ULD0 1010 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 GRIP1Q9Y3R0 1128 aa12.48□□□□□ -0.41
PDZRN3-205ENST00000466780 EFCAB10A6NFE3 127 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 EIF3FO00303 357 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 NDUFB5O43674 189 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 RPL17P18621 184 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 DDOSTP39656 456 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 CRATP43155 626 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 ZNF79Q15937 498 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 TIMM50Q3ZCQ8 353 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 ZFP69Q49AA0 526 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms