RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SLC1A6P48664 564 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 SKP1P63208 163 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 FOXK2Q01167 660 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 BST1Q10588 318 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 CSTF3Q12996 717 aaKnown RBP15.21■□□□□ 0.03
GPC1-207ENST00000466624 STX3Q13277 289 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 CUL3Q13618 768 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 DEPDC1Q5TB30 811 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 KANK2Q63ZY3 851 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 CHSY3Q70JA7 882 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 NLGN4XQ8N0W4 816 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 SRFBP1Q8NEF9 429 aaKnown RBP15.21■□□□□ 0.03
GPC1-207ENST00000466624 NLGN4YQ8NFZ3 816 aaPredicted RBP15.21■□□□□ 0.03
GPC1-207ENST00000466624 OR2L5Q8NG80 312 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 SELENOMQ8WWX9 145 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 CCT6BQ92526 530 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 MS4A6EQ96DS6 147 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 SMIM10Q96HG1 83 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 MTERF1Q99551 399 aaKnown RBP15.21■□□□□ 0.03
GPC1-207ENST00000466624 MACROD1Q9BQ69 325 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 FAM117AQ9C073 453 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 AICDAQ9GZX7 198 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 CCDC86Q9H6F5 360 aaKnown RBP15.21■□□□□ 0.03
GPC1-207ENST00000466624 MANSC1Q9H8J5 431 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 DHCR7Q9UBM7 475 aaKnown RBP15.21■□□□□ 0.03
GPC1-207ENST00000466624 HAO1Q9UJM8 370 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 CDC14AQ9UNH5 594 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 MAGEB17A8MXT2 336 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 H0YIG0 161 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 FOXS1O43638 330 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 SNNO75324 88 aaPredicted RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 CRCPO75575 148 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 MED26O95402 600 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 PDYNP01213 254 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 STATHP02808 62 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 CAPNS1P04632 268 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 CCNYL3P0C7X3 344 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 ALOX12P18054 663 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 HNRNPH1P31943 449 aaKnown RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 TSFMP43897 325 aaKnown RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 AVPR1BP47901 424 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 FOXA1P55317 472 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 PCBP4P57723 403 aaKnown RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 TGM3Q08188 693 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 ABHD18Q0P651 414 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 DDX39BQ13838 428 aaKnown RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 TOR1AIP1Q5JTV8 583 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 KHDRBS2Q5VWX1 349 aaKnown RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 ATG14Q6ZNE5 492 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 TIPARPQ7Z3E1 657 aaKnown RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 ZFAND4Q86XD8 727 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 CLYBLQ8N0X4 340 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 GBP7Q8N8V2 638 aaPredicted RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 GALNT6Q8NCL4 622 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 SNIP1Q8TAD8 396 aaKnown RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 UTP15Q8TED0 518 aaKnown RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 FGF11Q92914 225 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 KCNA7Q96RP8 456 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 SERPINI1Q99574 410 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 CENPKQ9BS16 269 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 REXO4Q9GZR2 422 aaKnown RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 CLK4Q9HAZ1 481 aaKnown RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 ANKHQ9HCJ1 492 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 TNFRSF12AQ9NP84 129 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 LHX9Q9NQ69 397 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 THAP1Q9NVV9 213 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 MRPS2Q9Y399 296 aaKnown RBP15.2■□□□□ 0.02
GPC1-207ENST00000466624 RAP2CQ9Y3L5 183 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 TIMM22Q9Y584 194 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 SCN3AQ9NY46 2000 aa15.2■□□□□ 0.02
GPC1-207ENST00000466624 A0A088AWK7 358 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 ITM2AO43736 263 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 RAD1O60671 282 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 GALR3O60755 368 aaPredicted RBP15.19■□□□□ 0.02
GPC1-207ENST00000466624 SEMA3DO95025 777 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 CHEK2O96017 543 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 TGFB1P01137 390 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 ZNF888P0CJ79 500 aaPredicted RBP15.19■□□□□ 0.02
GPC1-207ENST00000466624 PIM1P11309 404 aaPredicted RBP15.19■□□□□ 0.02
GPC1-207ENST00000466624 ZNF10P21506 573 aaPredicted RBP15.19■□□□□ 0.02
GPC1-207ENST00000466624 AGXTP21549 392 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 ALAS2P22557 587 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 ATP1A2P50993 1020 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 NEK2P51955 445 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 RPS13P62277 151 aaKnown RBP15.19■□□□□ 0.02
GPC1-207ENST00000466624 DCDP81605 110 aaKnown RBP15.19■□□□□ 0.02
GPC1-207ENST00000466624 TCHHL1Q5QJ38 904 aaPredicted RBP15.19■□□□□ 0.02
GPC1-207ENST00000466624 SH2D4BQ5SQS7 431 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 TRIM40Q6P9F5 258 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 ZCCHC10Q8TBK6 192 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 DYDC1Q8WWB3 177 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 ZNF75CPQ92670 426 aaPredicted RBP15.19■□□□□ 0.02
GPC1-207ENST00000466624 KCNC2Q96PR1 638 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 SORT1Q99523 831 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 C17orf62Q9BQA9 187 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 TBCDQ9BTW9 1192 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 SHCBP1LQ9BZQ2 653 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 ROGDIQ9GZN7 287 aa15.19■□□□□ 0.02
GPC1-207ENST00000466624 ILKAPQ9H0C8 392 aaPredicted RBP15.19■□□□□ 0.02
GPC1-207ENST00000466624 KLHL31Q9H511 634 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms