RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 FBXO8Q9NRD0 319 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 STARD5Q9NSY2 213 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 MRPS2Q9Y399 296 aaKnown RBP10.61□□□□□ -0.71
VCP-204ENST00000466100 SCN2AQ99250 2005 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 NCOR2Q9Y618 2525 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 DMXL2Q8TDJ6 3036 aa10.61□□□□□ -0.71
VCP-204ENST00000466100 CCDC88CQ9P219 2028 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 GMNCA6NCL1 334 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 AGRPO00253 132 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 SLC28A1O00337 649 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 PLPP1O14494 284 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 TXNDC9O14530 226 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 LSM1O15116 133 aaKnown RBP10.6□□□□□ -0.71
VCP-204ENST00000466100 ZSCAN9O15535 394 aaPredicted RBP10.6□□□□□ -0.71
VCP-204ENST00000466100 OR2B3O76000 313 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 RSL1D1O76021 490 aaKnown RBP10.6□□□□□ -0.71
VCP-204ENST00000466100 SCELO95171 688 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 TGFB1P01137 390 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 EIF2S1P05198 315 aaKnown RBP10.6□□□□□ -0.71
VCP-204ENST00000466100 SERPIND1P05546 499 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 ITIH1P19827 911 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 PTX3P26022 381 aaPredicted RBP10.6□□□□□ -0.71
VCP-204ENST00000466100 ARFIP1P53367 373 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 RGS1Q08116 209 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 IL11RAQ14626 422 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 KIAA0040Q15053 153 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.6□□□□□ -0.71
VCP-204ENST00000466100 SLC9B1Q4ZJI4 515 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 TMEM35AQ53FP2 167 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 TOR1AIP1Q5JTV8 583 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 EPGNQ6UW88 154 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 RAB11FIP2Q7L804 512 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 BPHLQ86WA6 291 aaPredicted RBP10.6□□□□□ -0.71
VCP-204ENST00000466100 MARCH9Q86YJ5 346 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 DDIASQ8IXT1 998 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 METTL4Q8N3J2 472 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 ZNF655Q8N720 491 aaPredicted RBP10.6□□□□□ -0.71
VCP-204ENST00000466100 UTP15Q8TED0 518 aaKnown RBP10.6□□□□□ -0.71
VCP-204ENST00000466100 CCT6BQ92526 530 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 GAL3ST3Q96A11 431 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 QRFPRQ96P65 431 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 SERPINI1Q99574 410 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 REXO4Q9GZR2 422 aaKnown RBP10.6□□□□□ -0.71
VCP-204ENST00000466100 FANCEQ9HB96 536 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 NPHS2Q9NP85 383 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 SIRT5Q9NXA8 310 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 VPS29Q9UBQ0 182 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 GIMAP2Q9UG22 337 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 RARRES3Q9UL19 164 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 SLC12A4Q9UP95 1085 aa10.6□□□□□ -0.71
VCP-204ENST00000466100 ATP6AP2A0A1C7CYW4 349 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 HYKKA2RU49 373 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 FAM149AA5PLN7 773 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 TRPC5OSA6NMA1 111 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 PLD2O14939 933 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 RGS14O43566 566 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 SH3BGRLO75368 114 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 ATP6AP2O75787 350 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 KLHL18O94889 574 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 ZNF888P0CJ79 500 aaPredicted RBP10.59□□□□□ -0.71
VCP-204ENST00000466100 EPHA3P29320 983 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 BSGP35613 385 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 IDH3AP50213 366 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 AQP5P55064 265 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 RAB15P59190 212 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 STXBP1P61764 594 aaKnown RBP10.59□□□□□ -0.71
VCP-204ENST00000466100 FOXM1Q08050 763 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 GRM7Q14831 915 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 PRAMEF17Q5VTA0 474 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 GARNL3Q5VVW2 1013 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 PWWP2BQ6NUJ5 590 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 TLDC1Q6P9B6 456 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 CYB5D1Q6P9G0 228 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 ABHD17CQ6PCB6 329 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 ZNF793Q6ZN11 406 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 CHSY3Q70JA7 882 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 LARP4Q71RC2 724 aaKnown RBP eCLIP10.59□□□□□ -0.713e-6■□□□□ 9.6
VCP-204ENST00000466100 PRSS41Q7RTY9 318 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 PDSS2Q86YH6 399 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 GALNT15Q8N3T1 639 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 DTWD1Q8N5C7 304 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 OR2L5Q8NG80 312 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 WDR36Q8NI36 951 aaKnown RBP10.59□□□□□ -0.71
VCP-204ENST00000466100 ZCCHC10Q8TBK6 192 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 ACTRT2Q8TDY3 377 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 CHTF18Q8WVB6 975 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 C10orf82Q8WW14 230 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 N4BP2L2Q92802 583 aaPredicted RBP10.59□□□□□ -0.71
VCP-204ENST00000466100 THOC1Q96FV9 657 aaKnown RBP10.59□□□□□ -0.71
VCP-204ENST00000466100 APIPQ96GX9 242 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 METTL2AQ96IZ6 378 aaKnown RBP10.59□□□□□ -0.71
VCP-204ENST00000466100 PPP1R36Q96LQ0 422 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 TEFMQ96QE5 360 aaKnown RBP10.59□□□□□ -0.71
VCP-204ENST00000466100 OR52B2Q96RD2 323 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 CTRCQ99895 268 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 EBF4Q9BQW3 602 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 SIKE1Q9BRV8 207 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 MRPL1Q9BYD6 325 aaKnown RBP10.59□□□□□ -0.71
VCP-204ENST00000466100 NLNQ9BYT8 704 aa10.59□□□□□ -0.71
VCP-204ENST00000466100 TRIM55Q9BYV6 548 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms