RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 PSIP1O75475 530 aaKnown RBP9.53□□□□□ -0.88
PTPRD-207ENST00000463477 RECQL5O94762 991 aaPredicted RBP9.53□□□□□ -0.88
PTPRD-207ENST00000463477 JUPP14923 745 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 PTPN6P29350 595 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 S100A3P33764 101 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 IGFALSP35858 605 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 TRIM23P36406 574 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 TRPC1P48995 793 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 CDK9P50750 372 aaKnown RBP9.53□□□□□ -0.88
PTPRD-207ENST00000463477 GZMMP51124 257 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 NOVA1P51513 510 aaKnown RBP9.53□□□□□ -0.88
PTPRD-207ENST00000463477 ARSFP54793 590 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 SEMG2Q02383 582 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 ABHD18Q0P651 414 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 BNIP3Q12983 259 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 DAG1Q14118 895 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 E2F2Q14209 437 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 PTCHD3Q3KNS1 767 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 LDLRAP1Q5SW96 308 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 HENMT1Q5T8I9 393 aaKnown RBP9.53□□□□□ -0.88
PTPRD-207ENST00000463477 FRG2Q64ET8 278 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 TTC33Q6PID6 262 aaPredicted RBP9.53□□□□□ -0.88
PTPRD-207ENST00000463477 RFLNAQ6ZTI6 216 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 NLRP8Q86W28 1048 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 NAXDQ8IW45 347 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 NRSN1Q8IZ57 195 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 TMEM132CQ8N3T6 1108 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 DEFB124Q8NES8 71 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 TBC1D20Q96BZ9 403 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 COQ10AQ96MF6 247 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 FRG2BQ96QU4 278 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 USE1Q9NZ43 259 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.53□□□□□ -0.88
PTPRD-207ENST00000463477 PCOLCE2Q9UKZ9 415 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 COQ6Q9Y2Z9 468 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 PCDHGA11Q9Y5H2 935 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 GMEB1Q9Y692 573 aa9.53□□□□□ -0.88
PTPRD-207ENST00000463477 MYOCOSA0A1B0GUC4 107 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 GSTA4O15217 222 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 CSF2P04141 144 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 ALPLP05186 524 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 HOXC4P09017 264 aaPredicted RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 GNAO1P09471 354 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 EPHA8P29322 1005 aaPredicted RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 GRK6P43250 576 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 HSPA14Q0VDF9 509 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 FZD2Q14332 565 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 RBBP5Q15291 538 aaKnown RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 TRIP6Q15654 476 aaKnown RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 CPSF6Q16630 551 aaKnown RBP eCLIP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 PLA2G4EQ3MJ16 856 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 KANSL1Q7Z3B3 1105 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 TECPR1Q7Z6L1 1165 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 GLRX5Q86SX6 157 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 FBXO15Q8NCQ5 510 aaPredicted RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 OR10A6Q8NH74 314 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 BAHD1Q8TBE0 780 aaPredicted RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 RHBDD1Q8TEB9 315 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 SETD7Q8WTS6 366 aaKnown RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 BTN2A2Q8WVV5 523 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 STARD8Q92502 1023 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 NMD3Q96D46 503 aaKnown RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 DTNBP1Q96EV8 351 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 AURKBQ96GD4 344 aaPredicted RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 CNDP2Q96KP4 475 aaKnown RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 CAMK1GQ96NX5 476 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 SEPHS2Q99611 448 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 CDC6Q99741 560 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 THUMPD3Q9BV44 507 aaKnown RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 OSBPL10Q9BXB5 764 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 BRF2Q9HAW0 419 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 TIMMDC1Q9NPL8 285 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 DCAF13Q9NV06 445 aaKnown RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 RSL24D1Q9UHA3 163 aaKnown RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 DLGAP4Q9Y2H0 992 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 AP1M2Q9Y6Q5 423 aa9.52□□□□□ -0.89
PTPRD-207ENST00000463477 ARID1BQ8NFD5 2236 aaPredicted RBP9.52□□□□□ -0.89
PTPRD-207ENST00000463477 EME2A4GXA9 379 aaPredicted RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 H0YIV9 168 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 CXCR6O00574 342 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ALBP02768 609 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 AMD1P17707 334 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 SDC1P18827 310 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 PRPS1L1P21108 318 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 HNF4AP41235 474 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 PRLHRP49683 370 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 PNLIPRP1P54315 467 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 HNRNPKP61978 463 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ESRRGP62508 458 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 PHC1P78364 1004 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 SRSF11Q05519 484 aaKnown RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 DPTQ07507 201 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 BIRC2Q13490 618 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ACOX1Q15067 660 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 IRF4Q15306 451 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 INAVAQ3KP66 663 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ZBED5Q49AG3 693 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 PYCR3Q53H96 274 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 C10orf62Q5T681 223 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms