RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 RAXQ9Y2V3 346 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 SLC22A7Q9Y694 548 aa11.21□□□□□ -0.61
CPNE1-221ENST00000462352 A0A0A6YYC8 382 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 LOC101059948A0A1B0GTJ6 334 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 LRIT2A6NDA9 550 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 MAGEB17A8MXT2 336 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 C4orf51C9J302 202 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 H3BQF6 201 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 I3L1I5 382 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 TAF4O00268 1085 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 DYNC1I1O14576 645 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 NSA2O95478 260 aaKnown RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 TGFB1P01137 390 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 SERPINE1P05121 402 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ENO1P06733 434 aaKnown RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 CHRNGP07510 517 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ZNF888P0CJ79 500 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 SMIM10L1P0DMW3 83 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ALOX12P18054 663 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 AGXTP21549 392 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 HMOX2P30519 316 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ARRB2P32121 409 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 SERPINB5P36952 375 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 EIF2S3P41091 472 aaKnown RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 OR1D4P47884 311 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 AVPR1BP47901 424 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 NEK2P51955 445 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 FOXA1P55317 472 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 RAB8AP61006 207 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 RPS13P62277 151 aaKnown RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 PHEXP78562 749 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 GALNT1Q10472 559 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 IFT88Q13099 833 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 RCN2Q14257 317 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 SLC9A5Q14940 896 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 HERC3Q15034 1050 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 CHI3L2Q15782 390 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 NKAIN1Q4KMZ8 207 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ARL13AQ5H913 290 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 TCHHL1Q5QJ38 904 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 CES4AQ5XG92 561 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 PRMT9Q6P2P2 845 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ATG14Q6ZNE5 492 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ABHD13Q7L211 337 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 CUZD1Q86UP6 607 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 PDSS2Q86YH6 399 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 AFAP1L2Q8N4X5 818 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 KDF1Q8NAX2 398 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 OR9A4Q8NGU2 314 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 UTP15Q8TED0 518 aaKnown RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 CT55Q8WUE5 264 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 GAL3ST3Q96A11 431 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 MTFMTQ96DP5 389 aaKnown RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 MS4A6EQ96DS6 147 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 MMABQ96EY8 250 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 CMTM7Q96FZ5 175 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 SMIM10Q96HG1 83 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 F2RL3Q96RI0 385 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 KCNA7Q96RP8 456 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 SLC29A3Q9BZD2 475 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 REXO4Q9GZR2 422 aaKnown RBP11.2□□□□□ -0.62
CPNE1-221ENST00000462352 CHST8Q9H2A9 424 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ELOVL6Q9H5J4 265 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ANKHQ9HCJ1 492 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ZNF304Q9HCX3 659 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 TNFRSF12AQ9NP84 129 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 DMRT3Q9NQL9 472 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 SLC22A11Q9NSA0 550 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 CDC14AQ9UNH5 594 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 SNX6Q9UNH7 406 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 TIMM22Q9Y584 194 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 MAU2Q9Y6X3 613 aa11.2□□□□□ -0.62
CPNE1-221ENST00000462352 ACACAQ13085 2346 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 FOXE1O00358 373 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-221ENST00000462352 MANBAO00462 879 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 KLK10O43240 276 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 ERI3O43414 337 aaKnown RBP11.19□□□□□ -0.62
CPNE1-221ENST00000462352 SH3BGRLO75368 114 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 KLHL18O94889 574 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 ONECUT2O95948 504 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 B3GALT4O96024 378 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 PDYNP01213 254 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 KRT6AP02538 564 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 KRT6BP04259 564 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 NEFHP12036 1026 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 TCN2P20062 427 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 BGNP21810 368 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 DLSTP36957 453 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 KRT6CP48668 564 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 PPP2R2AP63151 447 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 DEFB134Q4QY38 66 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 SGO1Q5FBB7 561 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 C10orf62Q5T681 223 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-221ENST00000462352 DEPDC1Q5TB30 811 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 ARHGAP40Q5TG30 622 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 KHDRBS2Q5VWX1 349 aaKnown RBP11.19□□□□□ -0.62
CPNE1-221ENST00000462352 FAM198BQ6UWH4 519 aa11.19□□□□□ -0.62
CPNE1-221ENST00000462352 CHSY3Q70JA7 882 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms