RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 CNOT10Q9H9A5 744 aaKnown RBP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 ASF1BQ9NVP2 202 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 ESPL1Q14674 2120 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 SPTAN1Q13813 2472 aaKnown RBP9.59□□□□□ -0.87
SF3A3-204ENST00000462258 OR2W5A6NFC9 320 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 URADA6NGE7 173 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 C4orf51C9J302 202 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 WFS1O76024 890 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 B3GALT4O96024 378 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 S100BP04271 92 aaPredicted RBP9.59□□□□□ -0.87
SF3A3-204ENST00000462258 FHP07954 510 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 SLC35E2BP0CK96 405 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 ITGAMP11215 1152 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 IL10P22301 178 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 JAK1P23458 1154 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 GMPRP36959 345 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 HNF4AP41235 474 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 TSFMP43897 325 aaKnown RBP9.59□□□□□ -0.87
SF3A3-204ENST00000462258 GLRBP48167 497 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 HSPA7P48741 367 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 RAB8AP61006 207 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 ARG2P78540 354 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 RHAGQ02094 409 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 GUCY2DQ02846 1103 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 MRPL49Q13405 166 aaKnown RBP9.59□□□□□ -0.87
SF3A3-204ENST00000462258 ABRAXAS2Q15018 415 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 RBBP5Q15291 538 aaKnown RBP9.59□□□□□ -0.87
SF3A3-204ENST00000462258 TLR1Q15399 786 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 NR6A1Q15406 480 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 FBXO48Q5FWF7 155 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 TOR1AIP1Q5JTV8 583 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 SLCO4C1Q6ZQN7 724 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 CPEB2Q7Z5Q1 589 aaKnown RBP9.59□□□□□ -0.87
SF3A3-204ENST00000462258 ANKRD37Q7Z713 158 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 TBC1D1Q86TI0 1168 aaPredicted RBP9.59□□□□□ -0.87
SF3A3-204ENST00000462258 GPSM1Q86YR5 675 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 SNX31Q8N9S9 440 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 TTLQ8NG68 377 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 UTP15Q8TED0 518 aaKnown RBP9.59□□□□□ -0.87
SF3A3-204ENST00000462258 PSMF1Q92530 271 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 ZNF592Q92610 1267 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 TSLPQ969D9 159 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 KIAA1191Q96A73 305 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 TBC1D20Q96BZ9 403 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 UBXN10Q96LJ8 280 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 LMF1Q96S06 567 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 CYTH2Q99418 400 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 LRRC1Q9BTT6 524 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 LANCL2Q9NS86 450 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 ZDHHC18Q9NUE0 388 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 DNAJC11Q9NVH1 559 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 GPRC5BQ9NZH0 403 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 NUDT4Q9NZJ9 180 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 CD274Q9NZQ7 290 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 RNF112Q9ULX5 631 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 NTNG1Q9Y2I2 539 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 CNTRLQ7Z7A1 2325 aa9.59□□□□□ -0.87
SF3A3-204ENST00000462258 HIVEP3Q5T1R4 2406 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 DYTNA2CJ06 578 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 MAGEB17A8MXT2 336 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 TAPBPO15533 448 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 AGFG2O95081 481 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 SERPINA6P08185 405 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 C1GALT1C1LP0DN25 315 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 ICAM2P13598 275 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 TFEBP19484 476 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 GSTM2P28161 218 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 PHBP35232 272 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 GGT5P36269 586 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 STXBP1P61764 594 aaKnown RBP9.58□□□□□ -0.88
SF3A3-204ENST00000462258 ZNF33BQ06732 778 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 HYAL2Q12891 473 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 BMPR2Q13873 1038 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 NSDHLQ15738 373 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 PDK4Q16654 411 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 BTBD16Q32M84 506 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 CDKL4Q5MAI5 379 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 FHL5Q5TD97 284 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 PLAG1Q6DJT9 500 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 SULT1C3Q6IMI6 304 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 PAPD4Q6PIY7 484 aaKnown RBP9.58□□□□□ -0.88
SF3A3-204ENST00000462258 TMIGD1Q6UXZ0 262 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 LRRC70Q7Z2Q7 622 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 KRT78Q8N1N4 520 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 AMER2Q8N7J2 671 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 NOA1Q8NC60 698 aaKnown RBP9.58□□□□□ -0.88
SF3A3-204ENST00000462258 CREB3L4Q8TEY5 395 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 CCT6BQ92526 530 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 GAL3ST3Q96A11 431 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 IMMP1LQ96LU5 166 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 CAPS2Q9BXY5 557 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 ALG9Q9H6U8 611 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 AGPAT4Q9NRZ5 378 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 NINJ2Q9NZG7 142 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 COPG2Q9UBF2 871 aa9.58□□□□□ -0.88
SF3A3-204ENST00000462258 MTRF1LQ9UGC7 380 aaKnown RBP9.58□□□□□ -0.88
SF3A3-204ENST00000462258 COPG1Q9Y678 874 aaKnown RBP9.58□□□□□ -0.88
SF3A3-204ENST00000462258 USP9YO00507 2555 aaPredicted RBP9.58□□□□□ -0.88
SF3A3-204ENST00000462258 SUPT3HB4E1H0 165 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 PSMD12O00232 456 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms