RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 A0A087WUV0 522 aaPredicted RBP12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 ESPNB1AK53 854 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 KLK8O60259 260 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 LCMT2O60294 686 aaKnown RBP12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 PRAMEF4O60810 478 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 KERAO60938 352 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 GUCA1CO95843 209 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 ANXA5P08758 320 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 SLC12A2P55011 1212 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 VSX2P58304 361 aaPredicted RBP12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 CSHL1Q14406 222 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 PRAMEF9Q5VWM5 478 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 ISLR2Q6UXK2 745 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 C17orf64Q86WR6 236 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 TMEM151BQ8IW70 566 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 DTWD1Q8N5C7 304 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 MZB1Q8WU39 189 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 UBTD2Q8WUN7 234 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.93□□□□□ -0.343e-6■■■■■ 50.8
SCAMP4-206ENST00000460767 N4BP2L2Q92802 583 aaPredicted RBP12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 THAP11Q96EK4 314 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 MVB12AQ96EY5 273 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 CNDP1Q96KN2 507 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 SPSB2Q99619 263 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 SPNS1Q9H2V7 528 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 CUTCQ9NTM9 273 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 RUVBL1Q9Y265 456 aaKnown RBP12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 HS3ST3B1Q9Y662 390 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 SETD2Q9BYW2 2564 aaPredicted RBP12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 NF1P21359 2839 aa12.93□□□□□ -0.34
SCAMP4-206ENST00000460767 PKDREJQ9NTG1 2253 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 HYKKA2RU49 373 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 VSTM2BA6NLU5 285 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 FOXS1O43638 330 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 LTA4HP09960 611 aaKnown RBP12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 CDH1P12830 882 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 CNTFP26441 200 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 BCL6P41182 706 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 SERPINB9P50453 376 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 KCNK10P57789 538 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 RPS15AP62244 130 aaKnown RBP12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 IRF9Q00978 393 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 FAM53BQ14153 422 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 HKDC1Q2TB90 917 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 FAM214AQ32MH5 1076 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 C18orf21Q32NC0 220 aaPredicted RBP12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 TUBB8Q3ZCM7 444 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 C1orf189Q5VU69 101 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 GARNL3Q5VVW2 1013 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 TMEM214Q6NUQ4 689 aaKnown RBP12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 ADGRD1Q6QNK2 874 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 KIRREL2Q6UWL6 708 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 TIFABQ6ZNK6 161 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 THOC6Q86W42 341 aaKnown RBP12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 PLD3Q8IV08 490 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 GSPT2Q8IYD1 628 aaKnown RBP12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 PLD6Q8N2A8 252 aaKnown RBP12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 TCAIMQ8N3R3 496 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 TMEM151AQ8N4L1 468 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 ACBD4Q8NC06 268 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 SLC5A11Q8WWX8 675 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 NXNL1Q96CM4 212 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 WDR34Q96EX3 536 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 TAAR6Q96RI8 345 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 NDC1Q9BTX1 674 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 NMRAL1Q9HBL8 299 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 ABI3Q9P2A4 366 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 ITGB1BP2Q9UKP3 347 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 SLC22A14Q9Y267 594 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 ACOT9Q9Y305 439 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 ASB1Q9Y576 335 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 SVILO95425 2214 aa12.92□□□□□ -0.34
SCAMP4-206ENST00000460767 A0A087X1B8 175 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 A0A096LPK6 155 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 TRAV17A0A0B4J275 112 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 TRBC2A0A5B9 178 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 KLHL2O95198 593 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 TBX6O95947 436 aaPredicted RBP12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 PIM1P11309 404 aaPredicted RBP12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 TFEBP19484 476 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 SOX11P35716 441 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 GDF5P43026 501 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 SCTRP47872 440 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 SERPINB8P50452 374 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 CCR8P51685 355 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 REEP5Q00765 189 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 SLC29A2Q14542 456 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 UAP1Q16222 522 aaPredicted RBP12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 CATSPEREQ5SY80 951 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 THEMIS2Q5TEJ8 643 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 SULT1C3Q6IMI6 304 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 PRMT9Q6P2P2 845 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 NXPE4Q6UWF7 544 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 SLCO4C1Q6ZQN7 724 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 TTLL10Q6ZVT0 673 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 OVCH1Q7RTY7 1134 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 CDH24Q86UP0 819 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 GPSM1Q86YR5 675 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 AFAP1L2Q8N4X5 818 aa12.91□□□□□ -0.34
SCAMP4-206ENST00000460767 CSNK1A1LQ8N752 337 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms