RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ST3GAL3Q11203 375 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 C18orf21Q32NC0 220 aaPredicted RBP14.26□□□□□ -0.13
PTPRU-205ENST00000460170 TOR1AIP1Q5JTV8 583 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 ADGRD2Q7Z7M1 963 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 FAM46DQ8NEK8 389 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 TMEM203Q969S6 136 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 PDCD10Q9BUL8 212 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 MND1Q9BWT6 205 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 RHCGQ9UBD6 479 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 CKLFQ9UBR5 152 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 AKAP8O43823 692 aaKnown RBP14.25□□□□□ -0.13
PTPRU-205ENST00000460170 FOXA1P55317 472 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 VBP1P61758 197 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 FADDQ13158 208 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 ZNF648Q5T619 568 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-205ENST00000460170 CAMKVQ8NCB2 501 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 POF1BQ8WVV4 589 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 ANKHQ9HCJ1 492 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 RHOP08100 348 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 LASP1Q14847 261 aaKnown RBP14.25□□□□□ -0.13
PTPRU-205ENST00000460170 PON2Q15165 354 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 ABHD13Q7L211 337 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 SCRN2Q96FV2 425 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 MGAT4BQ9UQ53 548 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 H7BY64 318 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 ORC5O43913 435 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 RLN1P04808 185 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 KCNA5P22460 613 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 UQCRC2P22695 453 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 ZNF776Q68DI1 518 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-205ENST00000460170 LETMD1Q6P1Q0 360 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 TUBA3EQ6PEY2 450 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 SHQ1Q6PI26 577 aaKnown RBP14.25□□□□□ -0.13
PTPRU-205ENST00000460170 TSPAN33Q86UF1 283 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 GATA6Q92908 595 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 NARS2Q96I59 477 aaKnown RBP14.25□□□□□ -0.13
PTPRU-205ENST00000460170 PRAP1Q96NZ9 151 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 SLC38A3Q99624 504 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 MED28Q9H204 178 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 TMEM189-UBE2V1I3L0A0 370 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 IGFALSP35858 605 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 MAGEA3P43357 314 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 SPINT3P49223 89 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 BLKP51451 505 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 IDNKQ5T6J7 187 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 FAM118AQ9NWS6 357 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 RNF186Q9NXI6 227 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 TMEM181Q9P2C4 612 aa14.25□□□□□ -0.13
PTPRU-205ENST00000460170 MYF6P23409 242 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 ADAM17P78536 824 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 LSAMPQ13449 338 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 KCT2Q8NC54 265 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 OR13J1Q8NGT2 312 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 GAL3ST4Q96RP7 486 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 TBX5Q99593 518 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 CDADC1Q9BWV3 514 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 MAGIXQ9H6Y5 334 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 ELL3Q9HB65 397 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-205ENST00000460170 MKKSQ9NPJ1 570 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-205ENST00000460170 PAK6Q9NQU5 681 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-205ENST00000460170 SIPA1L3O60292 1781 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-205ENST00000460170 LOC285095A0A1B0GVY8 99 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 EIF3FO00303 357 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-205ENST00000460170 MATN1P21941 496 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 GPX3P22352 226 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 S100A1P23297 94 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 TGFBR2P37173 567 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 PGDP52209 483 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 ARFIP1P53367 373 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 RAB33AQ14088 237 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 PAGE3Q5JUK9 113 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 KRT77Q7Z794 578 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 PIANPQ8IYJ0 282 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 GFM1Q96RP9 751 aaKnown RBP14.24□□□□□ -0.13
PTPRU-205ENST00000460170 R3HDMLQ9H3Y0 253 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 TNFRSF10DQ9UBN6 386 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 RPS17P08708 135 aaKnown RBP14.24□□□□□ -0.13
PTPRU-205ENST00000460170 CD72P21854 359 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 RPP38P78345 283 aaKnown RBP14.24□□□□□ -0.13
PTPRU-205ENST00000460170 ENPP6Q6UWR7 440 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 LARP4Q71RC2 724 aaKnown RBP eCLIP14.24□□□□□ -0.133e-11■□□□□ 9.9
PTPRU-205ENST00000460170 FIBINQ8TAL6 211 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 IL26Q9NPH9 171 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 NDRG2Q9UN36 371 aaKnown RBP14.24□□□□□ -0.13
PTPRU-205ENST00000460170 RPS3P23396 243 aaKnown RBP eCLIP14.24□□□□□ -0.133e-10■■■□□ 16.6
PTPRU-205ENST00000460170 SLC15A1P46059 708 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 PPP2R2BQ00005 443 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 ERN2Q76MJ5 926 aaKnown RBP14.24□□□□□ -0.13
PTPRU-205ENST00000460170 TSEN15Q8WW01 171 aaKnown RBP14.24□□□□□ -0.13
PTPRU-205ENST00000460170 OR5P2Q8WZ92 322 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 FAM129BQ96TA1 746 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 C17orf62Q9BQA9 187 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 PHF11Q9UIL8 331 aa14.24□□□□□ -0.13
PTPRU-205ENST00000460170 GMFGO60234 142 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 C8orf89P0DMQ9 161 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 CD70P32970 193 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 OR2B6P58173 313 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 PIGFQ07326 219 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 CRTC1Q6UUV9 634 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms