RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SCAMP1O15126 338 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 VILLO15195 856 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 BCAT2O15382 392 aaPredicted RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 DNAJA2O60884 412 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 RASSF9O75901 435 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 ZIC2O95409 532 aaPredicted RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 CHRM5P08912 532 aaPredicted RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 BCKDHAP12694 445 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 TIA1P31483 386 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS50-207ENST00000458530 AHRP35869 848 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 NEK2P51955 445 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 ARFIP1P53367 373 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 NME5P56597 212 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 CLDN8P56748 225 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 C21orf58P58505 322 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 UFM1P61960 85 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 RPS13P62277 151 aaKnown RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 SRSF11Q05519 484 aaKnown RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 TGM3Q08188 693 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 ZNF763Q0D2J5 394 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 LRRC74AQ0VAA2 488 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 NFYCQ13952 458 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 SF1Q15637 639 aaKnown RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 SAMD4BQ5PRF9 694 aaKnown RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 ARMC6Q6NXE6 501 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 NOXRED1Q6NXP6 359 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 RABEPKQ7Z6M1 372 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 OOSP2Q86WS3 158 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 NRROSQ86YC3 692 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 C2orf73Q8N5S3 287 aaPredicted RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 LMNTD1Q8N9Z9 388 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 LINC01555Q8NAE3 123 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 FAM13CQ8NE31 585 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 SRFBP1Q8NEF9 429 aaKnown RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 OR4K1Q8NGD4 311 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 OR9I1Q8NGQ6 314 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 PROKR1Q8TCW9 393 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 ZDHHC1Q8WTX9 485 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 TESCQ96BS2 214 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 APOLD1Q96LR9 279 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 NPAS2Q99743 824 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 LRRC61Q9BV99 259 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 CLMPQ9H6B4 373 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 XKR8Q9H6D3 395 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 UCK1Q9HA47 277 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 DNAAF2Q9NVR5 837 aaKnown RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 SCHIP1Q9P0W5 487 aaPredicted RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 MAP10Q9P2G4 905 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 ZNF624Q9P2J8 865 aaPredicted RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 INVSQ9Y283 1065 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 WBP11Q9Y2W2 641 aaKnown RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.57□□□□□ -1.04
VPS50-207ENST00000458530 TMEM131Q92545 1883 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 A0A1B0GTW7 788 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 GNG14A0A1W2PPG7 69 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 ARHGAP10A1A4S6 786 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 ZW10O43264 779 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 AQP9O43315 295 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 PCDH7O60245 1069 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 MGRN1O60291 552 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 CLEC3AO75596 197 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 DKK1O94907 266 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 KCNH1O95259 989 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 ANXA6P08133 673 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 SDC1P18827 310 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 CAPN3P20807 821 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 S100A3P33764 101 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 NXPH1P58417 271 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 PSME3P61289 254 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 RPS15AP62244 130 aaKnown RBP8.56□□□□□ -1.04
VPS50-207ENST00000458530 UBE2IP63279 158 aaKnown RBP8.56□□□□□ -1.04
VPS50-207ENST00000458530 HHEXQ03014 270 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 MAP7Q14244 749 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 GPR18Q14330 331 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 KIAA0040Q15053 153 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 VPS26BQ4G0F5 336 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 TIGD2Q4W5G0 525 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 TMEM35AQ53FP2 167 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 C1orf146Q5VVC0 180 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 LYSMD4Q5XG99 296 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 GALNT18Q6P9A2 607 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 IKBIPQ70UQ0 350 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 R3HCC1LQ7Z5L2 792 aaKnown RBP8.56□□□□□ -1.04
VPS50-207ENST00000458530 FUNDC1Q8IVP5 155 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.56□□□□□ -1.04
VPS50-207ENST00000458530 TMEFF1Q8IYR6 380 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 FBXW8Q8N3Y1 598 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 MINDY1Q8N5J2 469 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 DPP10Q8N608 796 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 C1orf52Q8N6N3 182 aaKnown RBP8.56□□□□□ -1.04
VPS50-207ENST00000458530 FRMD1Q8N878 549 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 FAM46DQ8NEK8 389 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 TRPV3Q8NET8 790 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 VPS37AQ8NEZ2 397 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 OR2L3Q8NG85 312 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 OR4E2Q8NGC2 313 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 OR2A1Q8NGT9 310 aa8.56□□□□□ -1.04
VPS50-207ENST00000458530 CCL4L1Q8NHW4 92 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms