RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 Q0VFX4 171 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 DOC2AQ14183 400 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 PDK4Q16654 411 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 VWA5B1Q5TIE3 1220 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 METTL2BQ6P1Q9 378 aaKnown RBP12.6□□□□□ -0.39
COMMD1-206ENST00000458337 ADGRD1Q6QNK2 874 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 TIFABQ6ZNK6 161 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 NDUFAF7Q7L592 441 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 LRRC70Q7Z2Q7 622 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 PRICKLE2Q7Z3G6 844 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 KRT78Q8N1N4 520 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 PLD6Q8N2A8 252 aaKnown RBP12.6□□□□□ -0.39
COMMD1-206ENST00000458337 ZCCHC10Q8TBK6 192 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 PTCD3Q96EY7 689 aaKnown RBP12.6□□□□□ -0.39
COMMD1-206ENST00000458337 EFCAB11Q9BUY7 163 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 VN1R1Q9GZP7 353 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 RHBGQ9H310 441 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 KLHL31Q9H511 634 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 MKL2Q9ULH7 1088 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 IKBKGQ9Y6K9 419 aa12.6□□□□□ -0.39
COMMD1-206ENST00000458337 SCN2AQ99250 2005 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 FLNCQ14315 2725 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 LRIT2A6NDA9 550 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 POC1B-GALNT4F8VUJ3 575 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 K7EPI3 171 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 CHST10O43529 356 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 CCNT2O60583 730 aaKnown RBP12.59□□□□□ -0.39
COMMD1-206ENST00000458337 DNAJB6O75190 326 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 ALOX12BO75342 701 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 RDH16O75452 317 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 CLEC3AO75596 197 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 TBX6O95947 436 aaPredicted RBP12.59□□□□□ -0.39
COMMD1-206ENST00000458337 SNRPAP09012 282 aaKnown RBP12.59□□□□□ -0.39
COMMD1-206ENST00000458337 ZNF888P0CJ79 500 aaPredicted RBP12.59□□□□□ -0.39
COMMD1-206ENST00000458337 COX6A1P12074 109 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 ACPPP15309 386 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 CD22P20273 847 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 XCR1P46094 333 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 AGTR2P50052 363 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 SKP1P63208 163 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 LAPTM5Q13571 262 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 SLBPQ14493 270 aaKnown RBP eCLIP12.59□□□□□ -0.39
COMMD1-206ENST00000458337 SETDB1Q15047 1291 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 ADPRMQ3LIE5 342 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 DEFB134Q4QY38 66 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 KLC3Q6P597 504 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 IGFL2Q6UWQ7 119 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 ABHD13Q7L211 337 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 TAOK1Q7L7X3 1001 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 VN1R5Q7Z5H4 357 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 PLPP5Q8NEB5 264 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 UHMK1Q8TAS1 419 aaKnown RBP12.59□□□□□ -0.39
COMMD1-206ENST00000458337 C8orf44Q96CB5 159 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 IMMP1LQ96LU5 166 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 OR1F2PQ96R84 312 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 LHPPQ9H008 270 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 ZNF700Q9H0M5 742 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 VPS11Q9H270 941 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 EPB41L4BQ9H329 900 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 LANCL2Q9NS86 450 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 FETUBQ9UGM5 382 aa12.59□□□□□ -0.39
COMMD1-206ENST00000458337 UBR5O95071 2799 aaPredicted RBP12.59□□□□□ -0.39
COMMD1-206ENST00000458337 IGHV1-45A0A0A0MS14 117 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 SUPT3HB4E1H0 165 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 TRIM49D1C9J1S8 452 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 DPM1O60762 260 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 SUPT3HO75486 399 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 ALPPP05187 535 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 SERPIND1P05546 499 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 RBP1P09455 135 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 GLRBP48167 497 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 ALDH18A1P54886 795 aaKnown RBP12.58□□□□□ -0.4
COMMD1-206ENST00000458337 STXBP1P61764 594 aaKnown RBP12.58□□□□□ -0.4
COMMD1-206ENST00000458337 IRF8Q02556 426 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 CHIT1Q13231 466 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 SLC29A2Q14542 456 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 NAA30Q147X3 362 aaPredicted RBP12.58□□□□□ -0.4
COMMD1-206ENST00000458337 PCOLCEQ15113 449 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 PCBP2Q15366 365 aaKnown RBP eCLIP12.58□□□□□ -0.4
COMMD1-206ENST00000458337 XKR6Q5GH73 641 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 TECRLQ5HYJ1 363 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 LGSNQ5TDP6 509 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.58□□□□□ -0.4
COMMD1-206ENST00000458337 LAS2Q8IYD9 372 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 CNPY4Q8N129 248 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 TMEM151AQ8N4L1 468 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 RBMXL3Q8N7X1 1067 aaKnown RBP12.58□□□□□ -0.4
COMMD1-206ENST00000458337 SNX31Q8N9S9 440 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 OR5T3Q8NGG3 340 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.58□□□□□ -0.4
COMMD1-206ENST00000458337 EXT2Q93063 718 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 MS4A6EQ96DS6 147 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 EPN3Q9H201 632 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 ZNF358Q9NW07 568 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 HCN3Q9P1Z3 774 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 OPTCQ9UBM4 332 aa12.58□□□□□ -0.4
COMMD1-206ENST00000458337 NSG1A0A0A6YYJ2 146 aa12.57□□□□□ -0.4
COMMD1-206ENST00000458337 EXOC1LA0A1B0GW35 172 aa12.57□□□□□ -0.4
COMMD1-206ENST00000458337 OR2W5A6NFC9 320 aa12.57□□□□□ -0.4
COMMD1-206ENST00000458337 ANKDD1BA6NHY2 528 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms