RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 IGHV3-20A0A0C4DH32 117 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 URADA6NGE7 173 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 LRRC14BA6NHZ5 514 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 RIPK2O43353 540 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 BMP10O95393 424 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 PCNAP12004 261 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 MYBPC3Q14896 1274 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 CDKL4Q5MAI5 379 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 ADNP2Q6IQ32 1131 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 LANCL3Q6ZV70 420 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 TRMT10CQ7L0Y3 403 aaKnown RBP17.67■□□□□ 0.42
USP39-209ENST00000458268 KLHDC8AQ8IYD2 350 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 TEX9Q8N6V9 391 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 FAR2Q96K12 515 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 FUT8Q9BYC5 575 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 GPRC5BQ9NZH0 403 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 SLC22A7Q9Y694 548 aa17.67■□□□□ 0.42
USP39-209ENST00000458268 GALR3O60755 368 aaPredicted RBP17.66■□□□□ 0.42
USP39-209ENST00000458268 B4GALT2O60909 372 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 DNAJB6O75190 326 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 CEACAM4O75871 244 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 ALPPP05187 535 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 C8orf89P0DMQ9 161 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 MYBL2P10244 700 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 GGT5P36269 586 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 SKP1P63208 163 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 DDX39BQ13838 428 aaKnown RBP17.66■□□□□ 0.42
USP39-209ENST00000458268 ACAP2Q15057 778 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 HIST2H2ACQ16777 129 aaPredicted RBP17.66■□□□□ 0.42
USP39-209ENST00000458268 VWA5B1Q5TIE3 1220 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 HIST2H2AA3Q6FI13 130 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 CCDC91Q7Z6B0 441 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 UTP15Q8TED0 518 aaKnown RBP17.66■□□□□ 0.42
USP39-209ENST00000458268 UBLCP1Q8WVY7 318 aaPredicted RBP17.66■□□□□ 0.42
USP39-209ENST00000458268 PTCD3Q96EY7 689 aaKnown RBP17.66■□□□□ 0.42
USP39-209ENST00000458268 SARGQ9BW04 601 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 VN1R1Q9GZP7 353 aa17.66■□□□□ 0.42
USP39-209ENST00000458268 SMIM23A6NLE4 172 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 C4orf51C9J302 202 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 K7EPI3 171 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 ERI3O43414 337 aaKnown RBP17.65■□□□□ 0.42
USP39-209ENST00000458268 CHST10O43529 356 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 DPM1O60762 260 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 PRAMEF4O60810 478 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 SEC24DO94855 1032 aaPredicted RBP17.65■□□□□ 0.42
USP39-209ENST00000458268 CELA2AP08217 269 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 SNRPAP09012 282 aaKnown RBP17.65■□□□□ 0.42
USP39-209ENST00000458268 COX6A1P12074 109 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 EFNA3P52797 238 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 MLLT10P55197 1068 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 STXBP1P61764 594 aaKnown RBP17.65■□□□□ 0.42
USP39-209ENST00000458268 BTN3A2P78410 334 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 SLC29A2Q14542 456 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 PRAMEF9Q5VWM5 478 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 AMER2Q8N7J2 671 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 CREB3L4Q8TEY5 395 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 PHF21BQ96EK2 531 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 EFCAB11Q9BUY7 163 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 TGIF2Q9GZN2 237 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 SLC6A16Q9GZN6 736 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 L2HGDHQ9H9P8 463 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 XPR1Q9UBH6 696 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 TBK1Q9UHD2 729 aa17.65■□□□□ 0.42
USP39-209ENST00000458268 TTLL8A6PVC2 850 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 PSMD12O00232 456 aaPredicted RBP17.64■□□□□ 0.41
USP39-209ENST00000458268 SIX3O95343 332 aaPredicted RBP17.64■□□□□ 0.41
USP39-209ENST00000458268 HPP00738 406 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 SERPINA6P08185 405 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 ABHD2P08910 425 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 EPB42P16452 691 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 CD22P20273 847 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 CNTFP26441 200 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 HNRNPH1P31943 449 aaKnown RBP17.64■□□□□ 0.41
USP39-209ENST00000458268 CASRP41180 1078 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 PLA2G16P53816 162 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 HYAL2Q12891 473 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 TECRLQ5HYJ1 363 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 PAGE2BQ5JRK9 111 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 LGSNQ5TDP6 509 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 LINC00696Q6ZRV3 163 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 NDUFAF7Q7L592 441 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 PTGR2Q8N8N7 351 aaPredicted RBP17.64■□□□□ 0.41
USP39-209ENST00000458268 TTLQ8NG68 377 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 RHEBL1Q8TAI7 183 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 UBTD2Q8WUN7 234 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 TSLPQ969D9 159 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 NACC2Q96BF6 587 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 CNDP1Q96KN2 507 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 LHPPQ9H008 270 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 ZNF552Q9H707 407 aaPredicted RBP17.64■□□□□ 0.41
USP39-209ENST00000458268 COPS7BQ9H9Q2 264 aaPredicted RBP17.64■□□□□ 0.41
USP39-209ENST00000458268 C19orf25Q9UFG5 118 aaPredicted RBP17.64■□□□□ 0.41
USP39-209ENST00000458268 ZNF180Q9UJW8 692 aa17.64■□□□□ 0.41
USP39-209ENST00000458268 GOLGA8RI6L899 631 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 SMIM24O75264 130 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 ZIC2O95409 532 aaPredicted RBP17.63■□□□□ 0.41
USP39-209ENST00000458268 FHP07954 510 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 MTHFD2P13995 350 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 EPORP19235 508 aa17.63■□□□□ 0.41
USP39-209ENST00000458268 EEF1DP29692 281 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms