RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 AADATQ8N5Z0 425 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 RASGEF1AQ8N9B8 481 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 FBLIM1Q8WUP2 373 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 ASB11Q8WXH4 323 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 WDR12Q9GZL7 423 aaKnown RBP11.95□□□□□ -0.5
LINC00959-201ENST00000456581 DSN1Q9H410 356 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 IL1RAPQ9NPH3 570 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 THUMPD1Q9NXG2 353 aaKnown RBP11.95□□□□□ -0.5
LINC00959-201ENST00000456581 BOLA1Q9Y3E2 137 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 TESMINQ9Y4I5 508 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 TRPM6Q9BX84 2022 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 CLIC1O00299 241 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 FPGTO14772 594 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 KCNK5O95279 499 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 ELFN1P0C7U0 828 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 EBLN1P0CF75 366 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 GADD45AP24522 165 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 PDHA2P29803 388 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 SLC19A1P41440 591 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 ST13P50502 369 aaKnown RBP11.95□□□□□ -0.5
LINC00959-201ENST00000456581 DMC1Q14565 340 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 DGUOKQ16854 277 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 HENMT1Q5T8I9 393 aaKnown RBP11.95□□□□□ -0.5
LINC00959-201ENST00000456581 CAPN13Q6MZZ7 669 aaPredicted RBP11.95□□□□□ -0.5
LINC00959-201ENST00000456581 KLHL17Q6TDP4 642 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 PHOSPHO2Q8TCD6 241 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 SH3KBP1Q96B97 665 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 ZHX1-C8orf76Q96EF9 292 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 DACH2Q96NX9 599 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 EHD1Q9H4M9 534 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 RAD18Q9NS91 495 aa11.95□□□□□ -0.5
LINC00959-201ENST00000456581 MYO15AQ9UKN7 3530 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 M0R082 166 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 ZNF197O14709 1029 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 SLC22A1O15245 554 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 GBAP04062 536 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 FABP3P05413 133 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 ITGAMP11215 1152 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 LAMP1P11279 417 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 CLDN8P56748 225 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 UBE3AQ05086 875 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 FNDC3BQ53EP0 1204 aaKnown RBP11.94□□□□□ -0.5
LINC00959-201ENST00000456581 LRIF1Q5T3J3 769 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 ANGPTL8Q6UXH0 198 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 CCDC103Q8IW40 242 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 ZZZ3Q8IYH5 903 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 MCFD2Q8NI22 146 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 STARD8Q92502 1023 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 AP2M1Q96CW1 435 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 ROGDIQ9GZN7 287 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 DCSTAMPQ9H295 470 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 GPR83Q9NYM4 423 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 EPOPA6NHQ4 379 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 HEPACAM2A8MVW5 462 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 HSMCR30P0CW71 290 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 CYP2A6P11509 494 aaPredicted RBP11.94□□□□□ -0.5
LINC00959-201ENST00000456581 MMP12P39900 470 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 MAGEA2P43356 314 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 PTPN5P54829 565 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 TOP3AQ13472 1001 aaPredicted RBP11.94□□□□□ -0.5
LINC00959-201ENST00000456581 UGT8Q16880 541 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 SYT6Q5T7P8 510 aaPredicted RBP11.94□□□□□ -0.5
LINC00959-201ENST00000456581 ATAD3BQ5T9A4 648 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 AGAP7PQ5VUJ5 663 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 TECPR1Q7Z6L1 1165 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 LYSMD2Q8IV50 215 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 ETFBKMTQ8IXQ9 262 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 SYTL1Q8IYJ3 562 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 GLB1L3Q8NCI6 653 aaPredicted RBP11.94□□□□□ -0.5
LINC00959-201ENST00000456581 CAPSLQ8WWF8 208 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 ARRDC3Q96B67 414 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 VMP1Q96GC9 406 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 SH3GL1Q99961 368 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 NTMT1Q9BV86 223 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 OR51E2Q9H255 320 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 SCN3BQ9NY72 215 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 NDRG4Q9ULP0 352 aaKnown RBP11.94□□□□□ -0.5
LINC00959-201ENST00000456581 ATG2AQ2TAZ0 1938 aa11.94□□□□□ -0.5
LINC00959-201ENST00000456581 LINC00854A0A1B0GVQ3 168 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 ERN1O75460 977 aaKnown RBP11.93□□□□□ -0.5
LINC00959-201ENST00000456581 HIST1H2AGP0C0S8 130 aaPredicted RBP11.93□□□□□ -0.5
LINC00959-201ENST00000456581 CD22P20273 847 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 HIST1H2ADP20671 130 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 KDELR2P33947 212 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 WASP42768 502 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 IDH2P48735 452 aaKnown RBP11.93□□□□□ -0.5
LINC00959-201ENST00000456581 TGM4P49221 684 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 CLK1P49759 484 aaKnown RBP11.93□□□□□ -0.5
LINC00959-201ENST00000456581 MAD2L1Q13257 205 aaPredicted RBP11.93□□□□□ -0.5
LINC00959-201ENST00000456581 SHHQ15465 462 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.93□□□□□ -0.5
LINC00959-201ENST00000456581 TANGO2Q6ICL3 276 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 CYP2U1Q7Z449 544 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 POC5Q8NA72 575 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 HIST1H2AHQ96KK5 128 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 Q96MT0 163 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 ASB16Q96NS5 453 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 HIST1H2AJQ99878 128 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 H2AFJQ9BTM1 129 aa11.93□□□□□ -0.5
LINC00959-201ENST00000456581 SLC12A9Q9BXP2 914 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms