RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ZDHHC24Q6UX98 284 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 CEP128Q6ZU80 1094 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 CCDC91Q7Z6B0 441 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 KRT78Q8N1N4 520 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 SIRT6Q8N6T7 355 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 ANKRD53Q8N9V6 530 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 HAS2Q92819 552 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 TBC1D20Q96BZ9 403 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 MOCOSQ96EN8 888 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 C19orf60Q96EN9 201 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 PEX11GQ96HA9 241 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 SPNS1Q9H2V7 528 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 EHD1Q9H4M9 534 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 CAB39LQ9H9S4 337 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 LRRC4CQ9HCJ2 640 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 WWOXQ9NZC7 414 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 COPG2Q9UBF2 871 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 ZNF860A6NHJ4 632 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 PHGDHO43175 533 aaKnown RBP16.84■□□□□ 0.29
MSH6-207ENST00000456246 SEC24DO94855 1032 aaPredicted RBP16.84■□□□□ 0.29
MSH6-207ENST00000456246 FHP07954 510 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 ZNF888P0CJ79 500 aaPredicted RBP16.84■□□□□ 0.29
MSH6-207ENST00000456246 CD1DP15813 335 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 CRABP2P29373 138 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 RHAGQ02094 409 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 ABRAXAS2Q15018 415 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 NR6A1Q15406 480 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 NSDHLQ15738 373 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 WHAMMP3Q1A5X7 153 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 ABHD17BQ5VST6 288 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 SLCO4C1Q6ZQN7 724 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 LANCL3Q6ZV70 420 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 ANKRD37Q7Z713 158 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 PPM1NQ8N819 430 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 PDPRQ8NCN5 879 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 UTP15Q8TED0 518 aaKnown RBP16.84■□□□□ 0.29
MSH6-207ENST00000456246 KIAA1191Q96A73 305 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 UBXN10Q96LJ8 280 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 LPAR4Q99677 370 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 NT5DC2Q9H857 520 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 LANCL2Q9NS86 450 aa16.84■□□□□ 0.29
MSH6-207ENST00000456246 A0A088AWK7 358 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 ANKUB1A6NFN9 424 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 CBX6O95503 412 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 DDAH2O95865 285 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 S100BP04271 92 aaPredicted RBP16.83■□□□□ 0.28
MSH6-207ENST00000456246 ITGAMP11215 1152 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 ZNF10P21506 573 aaPredicted RBP16.83■□□□□ 0.28
MSH6-207ENST00000456246 TNFSF10P50591 281 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 POLEQ07864 2286 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 MRPL49Q13405 166 aaKnown RBP16.83■□□□□ 0.28
MSH6-207ENST00000456246 BTBD16Q32M84 506 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 FAM180AQ6UWF9 173 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 TMIGD1Q6UXZ0 262 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 QSOX2Q6ZRP7 698 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 RAPH1Q70E73 1250 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 TBC1D1Q86TI0 1168 aaPredicted RBP16.83■□□□□ 0.28
MSH6-207ENST00000456246 CPAMD8Q8IZJ3 1885 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 ST6GALNAC3Q8NDV1 305 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 OR5T3Q8NGG3 340 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 SUN3Q8TAQ9 357 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 STAG3L4Q8TBR4 150 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 M1APQ8TC57 530 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 FBF1Q8TES7 1133 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 SSC4DQ8WTU2 575 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 GAL3ST3Q96A11 431 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 SCN2AQ99250 2005 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 DNAJC11Q9NVH1 559 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 CD274Q9NZQ7 290 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 RNF112Q9ULX5 631 aa16.83■□□□□ 0.28
MSH6-207ENST00000456246 CCDC189A1A4V9 331 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 NCF1BA6NI72 391 aaPredicted RBP16.82■□□□□ 0.28
MSH6-207ENST00000456246 NCF1CA8MVU1 366 aaPredicted RBP16.82■□□□□ 0.28
MSH6-207ENST00000456246 PSMD12O00232 456 aaPredicted RBP16.82■□□□□ 0.28
MSH6-207ENST00000456246 CLGNO14967 610 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 CHST10O43529 356 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 STK16O75716 305 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 URI1O94763 535 aaPredicted RBP16.82■□□□□ 0.28
MSH6-207ENST00000456246 SMIM10L1P0DMW3 83 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 GP1BBP13224 206 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 RNH1P13489 461 aaKnown RBP16.82■□□□□ 0.28
MSH6-207ENST00000456246 NCF1P14598 390 aaPredicted RBP16.82■□□□□ 0.28
MSH6-207ENST00000456246 GDF5P43026 501 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 GUCY2DQ02846 1103 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 ACTN3Q08043 901 aaPredicted RBP16.82■□□□□ 0.28
MSH6-207ENST00000456246 SLBPQ14493 270 aaKnown RBP eCLIP16.82■□□□□ 0.28
MSH6-207ENST00000456246 SLMAPQ14BN4 828 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 PAPD4Q6PIY7 484 aaKnown RBP16.82■□□□□ 0.28
MSH6-207ENST00000456246 BCORP1Q8N888 145 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 GRHL3Q8TE85 626 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 CREB3L4Q8TEY5 395 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 FAR1Q8WVX9 515 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 SMIM10Q96HG1 83 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 ZNF354BQ96LW1 612 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 C16orf45Q96MC5 204 aaPredicted RBP16.82■□□□□ 0.28
MSH6-207ENST00000456246 TMEM79Q9BSE2 394 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 EFCAB11Q9BUY7 163 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 RBCK1Q9BYM8 510 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 TSPYL1Q9H0U9 437 aa16.82■□□□□ 0.28
MSH6-207ENST00000456246 NMRAL1Q9HBL8 299 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms