RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 OR1N1Q8NGS0 311 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 OR9A1PQ8NGU1 263 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 GSDMBQ8TAX9 411 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 STT3BQ8TCJ2 826 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 GRHL3Q8TE85 626 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 SLC22A18Q96BI1 424 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 MIEF2Q96C03 454 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 MS4A14Q96JA4 679 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 C5orf34Q96MH7 638 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNF285Q96NJ3 590 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 AGAP4Q96P64 663 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 PANX3Q96QZ0 392 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 PKP4Q99569 1192 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 BARD1Q99728 777 aaKnown RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 ZFYVE21Q9BQ24 234 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 MACROD1Q9BQ69 325 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 WDR77Q9BQA1 342 aaPredicted RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 KIFC1Q9BW19 673 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 SLC29A3Q9BZD2 475 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 IL22Q9GZX6 179 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNF160Q9HCG1 818 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNF304Q9HCX3 659 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 MRPS30Q9NP92 439 aaKnown RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 INTS7Q9NVH2 962 aaKnown RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 C19orf73Q9NVV2 129 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 BFARQ9NZS9 450 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 SAMD15Q9P1V8 674 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 PTGFRNQ9P2B2 879 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 TNFRSF10DQ9UBN6 386 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 GNPTGQ9UJJ9 305 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 C3orf18Q9UK00 162 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 OSGIN2Q9Y236 505 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 RUVBL1Q9Y265 456 aaKnown RBP4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 LRRK2Q5S007 2527 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 DNAJC13O75165 2243 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 NOTCH2Q04721 2471 aa4.46□□□□□ -1.7
GTF3C3-208ENST00000455546 FREM3P0C091 2139 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 A0A0A6YYC8 382 aaPredicted RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 IGHV3-20A0A0C4DH32 117 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 IGKV1-8A0A0C4DH67 115 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 CTAGE9A4FU28 777 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 FITM1A5D6W6 292 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 ARHGEF33A8MVX0 844 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 KIAA1324LA8MWY0 1029 aaPredicted RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 E5RI56 91 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 H7BY64 318 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 I3L1I5 382 aaPredicted RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 KPNA5O15131 536 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 PSPNO60542 156 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 JRKO75564 520 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 IPO13O94829 963 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 HAUS5O94927 633 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 DDAH2O95865 285 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 SLC16A8O95907 504 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 SYF2O95926 243 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 IGHEP01854 428 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 KRT14P02533 472 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 RNASE1P07998 156 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 COL6A2P12110 1019 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 PKMP14618 531 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 PRKCAP17252 672 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 CMPK1P30085 196 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 RPA3P35244 121 aaPredicted RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 EFNA3P52797 238 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 PGGT1BP53609 377 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 EMP2P54851 167 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 EEF1A2Q05639 463 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 GPS1Q13098 491 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 LSAMPQ13449 338 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 CUL1Q13616 776 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 ZNF169Q14929 603 aaPredicted RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 ANKRD20A4Q4UJ75 823 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 AARS2Q5JTZ9 985 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 IRAK1BP1Q5VVH5 260 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 ATG9BQ674R7 924 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 NEPROQ6NW34 567 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 CASC4Q6P4E1 433 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 IGFL2Q6UWQ7 119 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 ISLR2Q6UXK2 745 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 CYHR1Q6ZMK1 362 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 NDUFAF7Q7L592 441 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 CAND1Q86VP6 1230 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 FJX1Q86VR8 437 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 REXO1L1PQ8IX06 675 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 SRRM1Q8IYB3 904 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 TXLNBQ8N3L3 684 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 RAB42Q8N4Z0 105 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 SIRT6Q8N6T7 355 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 ANKS4BQ8N8V4 417 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 AMER3Q8N944 861 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 PRELID2Q8N945 189 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 BRIX1Q8TDN6 353 aaKnown RBP4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 UBE2Q2Q8WVN8 375 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 FAR1Q8WVX9 515 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 PSMF1Q92530 271 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 TM9SF4Q92544 642 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 LPGAT1Q92604 370 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 PEX13Q92968 403 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 FKBP10Q96AY3 582 aa4.45□□□□□ -1.7
GTF3C3-208ENST00000455546 MMABQ96EY8 250 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms