RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 SPRTNQ9H040 489 aaPredicted RBP3.51□□□□□ -1.85
RBM39-220ENST00000455343 TFB2MQ9H5Q4 396 aaKnown RBP3.51□□□□□ -1.85
RBM39-220ENST00000455343 IFT22Q9H7X7 185 aa3.51□□□□□ -1.85
RBM39-220ENST00000455343 WDR54Q9H977 334 aa3.51□□□□□ -1.85
RBM39-220ENST00000455343 MRM3Q9HC36 420 aaKnown RBP3.51□□□□□ -1.85
RBM39-220ENST00000455343 IL26Q9NPH9 171 aa3.51□□□□□ -1.85
RBM39-220ENST00000455343 IMP3Q9NV31 184 aaKnown RBP3.51□□□□□ -1.85
RBM39-220ENST00000455343 RBM22Q9NW64 420 aaKnown RBP eCLIP3.51□□□□□ -1.851e-8■■■■■ 43.8
RBM39-220ENST00000455343 IFT80Q9P2H3 777 aaPredicted RBP3.51□□□□□ -1.85
RBM39-220ENST00000455343 DHCR7Q9UBM7 475 aaKnown RBP3.51□□□□□ -1.85
RBM39-220ENST00000455343 SEC14L3Q9UDX4 400 aa3.51□□□□□ -1.85
RBM39-220ENST00000455343 TESQ9UGI8 421 aaKnown RBP3.51□□□□□ -1.85
RBM39-220ENST00000455343 SCOCQ9UIL1 159 aa3.51□□□□□ -1.85
RBM39-220ENST00000455343 TINAGQ9UJW2 476 aa3.51□□□□□ -1.85
RBM39-220ENST00000455343 ACSL5Q9ULC5 683 aa3.51□□□□□ -1.85
RBM39-220ENST00000455343 PSMD13Q9UNM6 376 aa3.51□□□□□ -1.85
RBM39-220ENST00000455343 SHOC2Q9UQ13 582 aa3.51□□□□□ -1.85
RBM39-220ENST00000455343 PCDHGB6Q9Y5F9 930 aa3.51□□□□□ -1.85
RBM39-220ENST00000455343 CFAP20Q9Y6A4 193 aaKnown RBP3.51□□□□□ -1.85
RBM39-220ENST00000455343 JMJD1CQ15652 2540 aa3.51□□□□□ -1.85
RBM39-220ENST00000455343 PRRC2AP48634 2157 aaKnown RBP3.51□□□□□ -1.85
RBM39-220ENST00000455343 NSD1Q96L73 2696 aaPredicted RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 FN1P02751 2386 aaKnown RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 C17orf113A0A1B0GUU1 675 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 DYTNA2CJ06 578 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 GSAPA4D1B5 854 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 AGAP14A8MT82 685 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 E9PLN8 166 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 BTN3A1O00481 513 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 GAPDHSO14556 408 aaPredicted RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 ZSCAN9O15535 394 aaPredicted RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 SGTAO43765 313 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 PRAMEF2O60811 474 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 OR2B3O76000 313 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 RNF8O76064 485 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 RASAL1O95294 804 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 HPP00738 406 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 HSP90AA1P07900 732 aaKnown RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 PIRTP0C851 137 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 PVRP15151 417 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 DESP17661 470 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 HLA-DPA1P20036 260 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 UGT1A4P22310 534 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 GCSHP23434 173 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 CD86P42081 329 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 ARSEP51690 589 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 ELLP55199 621 aaPredicted RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 CASP6P55212 293 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 POLR2FP61218 127 aaKnown RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 ARG2P78540 354 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 FOLH1Q04609 750 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 CACNG1Q06432 222 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 XRCC4Q13426 336 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 BECN1Q14457 450 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 PAFAH1B3Q15102 231 aaKnown RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 MUM1Q2TAK8 710 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 TUBB8Q3ZCM7 444 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 SPDYE7PQ495Y7 208 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 ZNF658BQ4V348 819 aaPredicted RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 KRTCAP3Q53RY4 240 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 LDLRAP1Q5SW96 308 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 IRAK1BP1Q5VVH5 260 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 TXNRD3NBQ6F5E7 133 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 FAAH2Q6GMR7 532 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 TMEM220Q6QAJ8 160 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 NCCRP1Q6ZVX7 275 aaPredicted RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 BIVMQ86UB2 503 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 HSCBQ8IWL3 235 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 ADGRF3Q8IZF5 1079 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 DNAJC22Q8N4W6 341 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 MLKLQ8NB16 471 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 FLVCR1-AS1Q8TAF5 88 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 NRGNQ92686 78 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 HOXB13Q92826 284 aaPredicted RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.5□□□□□ -1.85
RBM39-220ENST00000455343 RMDN2Q96LZ7 410 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 Q96MF0 132 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 GPR137Q96N19 417 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 ZNF285Q96NJ3 590 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 TTC1Q99614 292 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 NRTNQ99748 197 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 AGPAT1Q99943 283 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 VKORC1Q9BQB6 163 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 MESP1Q9BRJ9 268 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 MRI1Q9BV20 369 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 ADGRE3Q9BY15 652 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 REXO4Q9GZR2 422 aaKnown RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 WWP1Q9H0M0 922 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 QRSL1Q9H0R6 528 aaKnown RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 SRMSQ9H3Y6 488 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 SAMSN1Q9NSI8 373 aaKnown RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 CCM2LQ9NUG4 571 aaPredicted RBP3.5□□□□□ -1.85
RBM39-220ENST00000455343 PARVAQ9NVD7 372 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 SMOXQ9NWM0 555 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 TAS2R14Q9NYV8 317 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 IL17CQ9P0M4 197 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 KCNN3Q9UGI6 736 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 SH3BGRL2Q9UJC5 107 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 CDC23Q9UJX2 597 aa3.5□□□□□ -1.85
RBM39-220ENST00000455343 MRPS2Q9Y399 296 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms