RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 CD274Q9NZQ7 290 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 TEKT2Q9UIF3 430 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 TRAV17A0A0B4J275 112 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 IGHV3-20A0A0C4DH32 117 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 MAGEB17A8MXT2 336 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 PSMD12O00232 456 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 CLGNO14967 610 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 CHST10O43529 356 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 CDC123O75794 336 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 WISP3O95389 354 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 FHP07954 510 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 SERPINA6P08185 405 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 CELA2AP08217 269 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 MYBL2P10244 700 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 ITGAMP11215 1152 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 CD1DP15813 335 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 GSTM2P28161 218 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 HPDP32754 393 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 HNF4AP41235 474 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 SLC6A12P48065 614 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 EFNA3P52797 238 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 RAB8AP61006 207 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 STXBP1P61764 594 aaKnown RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 SLC7A5Q01650 507 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 SLBPQ14493 270 aaKnown RBP eCLIP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 ABRAXAS2Q15018 415 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 TRADDQ15628 312 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 NSDHLQ15738 373 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 ZKSCAN8Q15776 578 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 EXT1Q16394 746 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 WHAMMP3Q1A5X7 153 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 EIF2S3LQ2VIR3 472 aaKnown RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 C18orf21Q32NC0 220 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 TOR1AIP1Q5JTV8 583 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 PLAG1Q6DJT9 500 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 TMIGD1Q6UXZ0 262 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 SLCO4C1Q6ZQN7 724 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 CEP128Q6ZU80 1094 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 TBC1D1Q86TI0 1168 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 SNX31Q8N9S9 440 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 PLPP5Q8NEB5 264 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 CATSPER1Q8NEC5 780 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 OR1N1Q8NGS0 311 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 SUN3Q8TAQ9 357 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 PRR7Q8TB68 274 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 UTP15Q8TED0 518 aaKnown RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 CCT6BQ92526 530 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 HAS2Q92819 552 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 KIAA1191Q96A73 305 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 TBC1D20Q96BZ9 403 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 MAGEB10Q96LZ2 347 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 LPAR4Q99677 370 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 LRRC1Q9BTT6 524 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 SLC6A16Q9GZN6 736 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 PITHD1Q9GZP4 211 aaPredicted RBP10.07□□□□□ -0.8
DDX39A-203ENST00000454233 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.07□□□□□ -0.84e-7■□□□□ 10.9
DDX39A-203ENST00000454233 NMRAL1Q9HBL8 299 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 LANCL2Q9NS86 450 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 RNF112Q9ULX5 631 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 HECTD1Q9ULT8 2610 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 PTPN13Q12923 2485 aa10.07□□□□□ -0.8
DDX39A-203ENST00000454233 FLNCQ14315 2725 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 LRRK2Q5S007 2527 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 A0A088AWK7 358 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 ESYT3A0FGR9 886 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 BLACEA4D250 179 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 OR2W5A6NFC9 320 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 ANKUB1A6NFN9 424 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 ANKDD1BA6NHY2 528 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 A8MUI8 341 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 B4GALT2O60909 372 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 STK16O75716 305 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 FAM155BO75949 473 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 CBX6O95503 412 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 B3GALT4O96024 378 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 C1QAP02745 245 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 RNH1P13489 461 aaKnown RBP10.06□□□□□ -0.8
DDX39A-203ENST00000454233 ZNF10P21506 573 aaPredicted RBP10.06□□□□□ -0.8
DDX39A-203ENST00000454233 CRABP2P29373 138 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 PHBP35232 272 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 GGT5P36269 586 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 HSPA7P48741 367 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 OR4D2P58180 307 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 OLR1P78380 273 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 RHAGQ02094 409 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 GUCY2DQ02846 1103 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 ZNF33BQ06732 778 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 OR4D1Q15615 310 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 PDK4Q16654 411 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 SFT2D3Q587I9 215 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 RPUSD3Q6P087 351 aaKnown RBP10.06□□□□□ -0.8
DDX39A-203ENST00000454233 PAPD4Q6PIY7 484 aaKnown RBP10.06□□□□□ -0.8
DDX39A-203ENST00000454233 FAM180AQ6UWF9 173 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.06□□□□□ -0.8
DDX39A-203ENST00000454233 SHISA5Q8N114 240 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 PDPRQ8NCN5 879 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 MNS1Q8NEH6 495 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 STAG3L4Q8TBR4 150 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 M1APQ8TC57 530 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 GRHL3Q8TE85 626 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms