RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 SH3BGRLO75368 114 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 WISP3O95389 354 aaPredicted RBP9.13□□□□□ -0.95
USP54-207ENST00000451492 C1QAP02745 245 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 SERPINA7P05543 415 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 GSTA2P09210 222 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 GNAZP19086 355 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 TFEBP19484 476 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 SLC6A12P48065 614 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 HNMTP50135 292 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 IRF9Q00978 393 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 SRSF11Q05519 484 aaKnown RBP9.13□□□□□ -0.95
USP54-207ENST00000451492 MFAP5Q13361 173 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 ZNF169Q14929 603 aaPredicted RBP9.13□□□□□ -0.95
USP54-207ENST00000451492 ABRAXAS2Q15018 415 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 SFT2D3Q587I9 215 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 CRB2Q5IJ48 1285 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 GRTP1Q5TC63 336 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 FHL5Q5TD97 284 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 ADNP2Q6IQ32 1131 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 TMEM205Q6UW68 189 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 IGFL3Q6UXB1 125 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 ABHD13Q7L211 337 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 ZNF572Q7Z3I7 529 aaPredicted RBP9.13□□□□□ -0.95
USP54-207ENST00000451492 ANKRD37Q7Z713 158 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 TBC1D1Q86TI0 1168 aaPredicted RBP9.13□□□□□ -0.95
USP54-207ENST00000451492 CYP4X1Q8N118 509 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 OR1N1Q8NGS0 311 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 NT5CQ8TCD5 201 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 UTP15Q8TED0 518 aaKnown RBP9.13□□□□□ -0.95
USP54-207ENST00000451492 IFT81Q8WYA0 676 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 CYTH2Q99418 400 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 TUBB6Q9BUF5 446 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.13□□□□□ -0.95
USP54-207ENST00000451492 ZNF700Q9H0M5 742 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 DNAJC11Q9NVH1 559 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 PCDHGA10Q9Y5H3 936 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 DOPEY2Q9Y3R5 2298 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 LOC102723996A0A087X1L8 192 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 URADA6NGE7 173 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 CYSRT1A8MQ03 144 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 A8MUA0 341 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 PSMD12O00232 456 aaPredicted RBP9.12□□□□□ -0.95
USP54-207ENST00000451492 ERI3O43414 337 aaKnown RBP9.12□□□□□ -0.95
USP54-207ENST00000451492 SEMA7AO75326 666 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 ACSL3O95573 720 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 FHP07954 510 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 SLC35E2BP0CK96 405 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 C1GALT1C1LP0DN25 315 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 MAOAP21397 527 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 AHRP35869 848 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 OR4D2P58180 307 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 ATP6V0D1P61421 351 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 SKP1P63208 163 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 BTN3A2P78410 334 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 RHAGQ02094 409 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 ACTN3Q08043 901 aaPredicted RBP9.12□□□□□ -0.95
USP54-207ENST00000451492 HYAL2Q12891 473 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 DLG1Q12959 904 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 PWP1Q13610 501 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 ELOAQ14241 798 aaKnown RBP9.12□□□□□ -0.95
USP54-207ENST00000451492 NSDHLQ15738 373 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 ZKSCAN8Q15776 578 aaPredicted RBP9.12□□□□□ -0.95
USP54-207ENST00000451492 WHAMMP3Q1A5X7 153 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 XKR6Q5GH73 641 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 MROH9Q5TGP6 573 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 PAPD4Q6PIY7 484 aaKnown RBP9.12□□□□□ -0.95
USP54-207ENST00000451492 TCAIMQ8N3R3 496 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 NOA1Q8NC60 698 aaKnown RBP9.12□□□□□ -0.95
USP54-207ENST00000451492 TRPV3Q8NET8 790 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 UHMK1Q8TAS1 419 aaKnown RBP9.12□□□□□ -0.95
USP54-207ENST00000451492 KCTD4Q8WVF5 259 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 ANKRD7Q92527 254 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 FAR2Q96K12 515 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 SARGQ9BW04 601 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 FAM129AQ9BZQ8 928 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 PHACTR1Q9C0D0 580 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 SLC6A16Q9GZN6 736 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 AICDAQ9GZX7 198 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 CNOT10Q9H9A5 744 aaKnown RBP9.12□□□□□ -0.95
USP54-207ENST00000451492 KCNK13Q9HB14 408 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 ZDHHC18Q9NUE0 388 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 ANKRD10Q9NXR5 420 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 NINJ2Q9NZG7 142 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 ASB1Q9Y576 335 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 SLC22A7Q9Y694 548 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 NBASA2RRP1 2371 aa9.12□□□□□ -0.95
USP54-207ENST00000451492 A1L4Q6 167 aa9.11□□□□□ -0.95
USP54-207ENST00000451492 ANKUB1A6NFN9 424 aa9.11□□□□□ -0.95
USP54-207ENST00000451492 ANKDD1BA6NHY2 528 aa9.11□□□□□ -0.95
USP54-207ENST00000451492 FAM227AF5H4B4 570 aa9.11□□□□□ -0.95
USP54-207ENST00000451492 H2AFYO75367 372 aaKnown RBP9.11□□□□□ -0.95
USP54-207ENST00000451492 STK16O75716 305 aa9.11□□□□□ -0.95
USP54-207ENST00000451492 WDPCPO95876 746 aa9.11□□□□□ -0.95
USP54-207ENST00000451492 LTA4HP09960 611 aaKnown RBP9.11□□□□□ -0.95
USP54-207ENST00000451492 RNF224P0DH78 156 aa9.11□□□□□ -0.95
USP54-207ENST00000451492 PCNAP12004 261 aa9.11□□□□□ -0.95
USP54-207ENST00000451492 JAK1P23458 1154 aa9.11□□□□□ -0.95
USP54-207ENST00000451492 HNRNPH1P31943 449 aaKnown RBP9.11□□□□□ -0.95
USP54-207ENST00000451492 PHBP35232 272 aa9.11□□□□□ -0.95
USP54-207ENST00000451492 SOX11P35716 441 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms