RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 ABHD13Q7L211 337 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 TMPRSS11BQ86T26 416 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 SIRT6Q8N6T7 355 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 AMER2Q8N7J2 671 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 OR5T3Q8NGG3 340 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 AGPAT4Q9NRZ5 378 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 SPTBN1Q01082 2364 aaKnown RBP18.28■□□□□ 0.52
USP40-207ENST00000450940 DYTNA2CJ06 578 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 ZNF860A6NHJ4 632 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 MAGEB17A8MXT2 336 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 TAPBPO15533 448 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 PHGDHO43175 533 aaKnown RBP18.27■□□□□ 0.52
USP40-207ENST00000450940 CHST10O43529 356 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 DNAJB6O75190 326 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 SEMA7AO75326 666 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 WDR47O94967 919 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 AGFG2O95081 481 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 SERPINA6P08185 405 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 ZNF888P0CJ79 500 aaPredicted RBP18.27■□□□□ 0.52
USP40-207ENST00000450940 SPRP35270 261 aaPredicted RBP18.27■□□□□ 0.52
USP40-207ENST00000450940 GDF5P43026 501 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 RAB10P61026 200 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 CDC16Q13042 620 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 C18orf21Q32NC0 220 aaPredicted RBP18.27■□□□□ 0.52
USP40-207ENST00000450940 MFSD4BQ5TF39 518 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 GPSM1Q86YR5 675 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 TCAIMQ8N3R3 496 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 TBC1D20Q96BZ9 403 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 PEX11GQ96HA9 241 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 CNDP1Q96KN2 507 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 CAPS2Q9BXY5 557 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 PITHD1Q9GZP4 211 aaPredicted RBP18.27■□□□□ 0.52
USP40-207ENST00000450940 NT5DC2Q9H857 520 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 GPRC5BQ9NZH0 403 aa18.27■□□□□ 0.52
USP40-207ENST00000450940 ICE1Q9Y2F5 2266 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 MAST4O15021 2626 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 IGHV3-20A0A0C4DH32 117 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 BLACEA4D250 179 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 URADA6NGE7 173 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 SEC24DO94855 1032 aaPredicted RBP18.26■□□□□ 0.51
USP40-207ENST00000450940 B3GALT4O96024 378 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 SERPIND1P05546 499 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 FHP07954 510 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 GP1BBP13224 206 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 ARG2P78540 354 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 OR4D1Q15615 310 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 SPATA6LQ8N4H0 392 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 ST6GALNAC3Q8NDV1 305 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 M1APQ8TC57 530 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 GRHL3Q8TE85 626 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 FAR1Q8WVX9 515 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 KIAA1191Q96A73 305 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 SEC16BQ96JE7 1060 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 TMEM79Q9BSE2 394 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 AICDAQ9GZX7 198 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 EHD1Q9H4M9 534 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 PLA2G3Q9NZ20 509 aa18.26■□□□□ 0.51
USP40-207ENST00000450940 ZGRF1Q86YA3 2104 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 TRAV17A0A0B4J275 112 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 ANKUB1A6NFN9 424 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 H2AFYO75367 372 aaKnown RBP18.25■□□□□ 0.51
USP40-207ENST00000450940 GSTM2P28161 218 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 STX2P32856 288 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 CKAP4Q07065 602 aaKnown RBP18.25■□□□□ 0.51
USP40-207ENST00000450940 NAB1Q13506 487 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 ABRAXAS2Q15018 415 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 RBBP5Q15291 538 aaKnown RBP18.25■□□□□ 0.51
USP40-207ENST00000450940 NSDHLQ15738 373 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 EXT1Q16394 746 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 SULT1C3Q6IMI6 304 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 TMIGD1Q6UXZ0 262 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 CCDC25Q86WR0 208 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 CTAGE3PQ8IX95 158 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 PPM1NQ8N819 430 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 PDPRQ8NCN5 879 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 TTLQ8NG68 377 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 OR1N1Q8NGS0 311 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 PRR7Q8TB68 274 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 FBF1Q8TES7 1133 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 SSC4DQ8WTU2 575 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 WDR34Q96EX3 536 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 UNKQ9C0B0 810 aaKnown RBP18.25■□□□□ 0.51
USP40-207ENST00000450940 KLHL31Q9H511 634 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 CNOT10Q9H9A5 744 aaKnown RBP18.25■□□□□ 0.51
USP40-207ENST00000450940 ZDHHC18Q9NUE0 388 aa18.25■□□□□ 0.51
USP40-207ENST00000450940 PTBP2Q9UKA9 531 aaKnown RBP18.25■□□□□ 0.51
USP40-207ENST00000450940 WIPF3A6NGB9 483 aa18.24■□□□□ 0.51
USP40-207ENST00000450940 NCF1BA6NI72 391 aaPredicted RBP18.24■□□□□ 0.51
USP40-207ENST00000450940 NCF1CA8MVU1 366 aaPredicted RBP18.24■□□□□ 0.51
USP40-207ENST00000450940 FAM155BO75949 473 aa18.24■□□□□ 0.51
USP40-207ENST00000450940 WDPCPO95876 746 aa18.24■□□□□ 0.51
USP40-207ENST00000450940 NCF1P14598 390 aaPredicted RBP18.24■□□□□ 0.51
USP40-207ENST00000450940 JAK1P23458 1154 aa18.24■□□□□ 0.51
USP40-207ENST00000450940 KCNC1P48547 511 aa18.24■□□□□ 0.51
USP40-207ENST00000450940 INAQ16352 499 aa18.24■□□□□ 0.51
USP40-207ENST00000450940 BTBD16Q32M84 506 aa18.24■□□□□ 0.51
USP40-207ENST00000450940 SFT2D3Q587I9 215 aa18.24■□□□□ 0.51
USP40-207ENST00000450940 ABHD17BQ5VST6 288 aa18.24■□□□□ 0.51
USP40-207ENST00000450940 ZNF324BQ6AW86 544 aaPredicted RBP18.24■□□□□ 0.51
USP40-207ENST00000450940 QSOX2Q6ZRP7 698 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms