RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 IRS1P35568 1242 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 SOX3P41225 446 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 CHRNA4P43681 627 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 RECQLP46063 649 aaPredicted RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 MAPKAPK2P49137 400 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 NRG1Q02297 640 aaPredicted RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 ZNF91Q05481 1191 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 PUDPQ08623 228 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 HNRNPA0Q13151 305 aaKnown RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 DOC2BQ14184 412 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 MAPKAPK3Q16644 382 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 FAM72AQ5TYM5 149 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 FAM160B1Q5W0V3 765 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 FAM72DQ6L9T8 149 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 BHLHB9Q6PI77 547 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 MPZL3Q6UWV2 235 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 TMEM107Q6UX40 140 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 C17orf107Q6ZR85 190 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 FAM72BQ86X60 149 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 TMEM192Q8IY95 271 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 FBXO39Q8N4B4 442 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 ZNF655Q8N720 491 aaPredicted RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 B3GNT7Q8NFL0 401 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 WDR36Q8NI36 951 aaKnown RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 RHEBL1Q8TAI7 183 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 ULK4Q96C45 1275 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 FAM120BQ96EK7 910 aaKnown RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 RADILQ96JH8 1075 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 ATOH8Q96SQ7 321 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 REEP1Q9H902 201 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 RPF1Q9H9Y2 349 aaKnown RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 SLC28A3Q9HAS3 691 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 HHATLQ9HCP6 504 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 RGS18Q9NS28 235 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 MS4A12Q9NXJ0 267 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 COA4Q9NYJ1 87 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 RNF112Q9ULX5 631 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 MRPL42Q9Y6G3 142 aaKnown RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 CDH10Q9Y6N8 788 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 MGAMO43451 1857 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 ANK1P16157 1881 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 TRAV20A0A0B4J274 112 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 PRAMEF33A0A0G2JMD5 474 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 LINC00587B1AMM8 73 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 EIF1AYO14602 144 aaKnown RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 ABCD4O14678 606 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 KPNA5O15131 536 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 INPPL1O15357 1258 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 SLC7A4O43246 635 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 SH3BP5O60239 455 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 PRAMEF10O60809 474 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 PLATP00750 562 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 SCG5P05408 212 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 HK1P19367 917 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 ITGB7P26010 798 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 APEX1P27695 318 aaKnown RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 RPL9P32969 192 aaKnown RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 TPI1P60174 286 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 PITX1P78337 314 aaPredicted RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 C2orf80Q0P641 193 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 KIAA0040Q15053 153 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 RBBP7Q16576 425 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 LGALSLQ3ZCW2 172 aaPredicted RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 RUNDC3AQ59EK9 446 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 ATG9BQ674R7 924 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 Q6ZSR9 355 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 RASSF6Q6ZTQ3 369 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 FAM92BQ6ZTR7 304 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 TRIM69Q86WT6 500 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 CILP2Q8IUL8 1156 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 DENND1CQ8IV53 801 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 KLHDC8BQ8IXV7 354 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 DEFB106AQ8N104 65 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 TMEM145Q8NBT3 493 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 OR4F6Q8NGB9 312 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 OR11H7Q8NGC8 314 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 UCN3Q969E3 161 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 ZBTB18Q99592 522 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 SIK2Q9H0K1 926 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 MAP3K20Q9NYL2 800 aaKnown RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 SEC14L4Q9UDX3 406 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 PHF11Q9UIL8 331 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 ZNF225Q9UK10 706 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 POLR3HQ9Y535 204 aaPredicted RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 CFAP20Q9Y6A4 193 aaKnown RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 MYLKQ15746 1914 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 HYKKA2RU49 373 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 FAM170BA6NMN3 283 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 WASH4PA8MWX3 477 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 SSX5O60225 188 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 PSIP1O75475 530 aaKnown RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 ANXA9O76027 345 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 CDRT1O95170 752 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 MLYCDO95822 493 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 SRCP12931 536 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 HMGB2P26583 209 aaKnown RBP8.31□□□□□ -1.08
LSM5-208ENST00000450169 STOMP27105 288 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 CRYBB2P43320 205 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 INPP1P49441 399 aa8.31□□□□□ -1.08
LSM5-208ENST00000450169 MEOX2P50222 304 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms