RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 HUS1BQ8NHY5 278 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 FAM76AQ8TAV0 307 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 WDR20Q8TBZ3 569 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 NT5CQ8TCD5 201 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 ZNF473Q8WTR7 871 aaKnown RBP7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 DYDC1Q8WWB3 177 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 PMEPA1Q969W9 287 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 TEFMQ96QE5 360 aaKnown RBP7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 FRG2BQ96QU4 278 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 KCNA7Q96RP8 456 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 SORT1Q99523 831 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 MTERF1Q99551 399 aaKnown RBP7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 DDA1Q9BW61 102 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 NLNQ9BYT8 704 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 SLC29A3Q9BZD2 475 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 B3GNT4Q9C0J1 378 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 ILKAPQ9H0C8 392 aaPredicted RBP7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 ELOVL6Q9H5J4 265 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 ATP13A2Q9NQ11 1180 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 FARSBQ9NSD9 589 aaKnown RBP7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 IRAK4Q9NWZ3 460 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 PSD3Q9NYI0 1048 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 ZDHHC2Q9UIJ5 367 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 SNX6Q9UNH7 406 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 RUVBL1Q9Y265 456 aaKnown RBP7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 TIMM22Q9Y584 194 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 PCDHGA3Q9Y5H0 932 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 B3GALT1Q9Y5Z6 326 aa7.19□□□□□ -1.26
AC004540.1-206ENST00000448056 SERTM1A2A2V5 107 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 MAGEB17A8MXT2 336 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 AZIN1O14977 448 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 NVLO15381 856 aaKnown RBP7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 ZSCAN9O15535 394 aaPredicted RBP7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 NDUFS4O43181 175 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 CRCPO75575 148 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 SCRG1O75711 98 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 MED26O95402 600 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 TIAF1O95411 115 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 TGFB1P01137 390 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 PDYNP01213 254 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 IL2RAP01589 272 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 KRT6AP02538 564 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 KRT6BP04259 564 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 NTRK1P04629 796 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 ADRB1P08588 477 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 SLC35G6P0C7Q6 338 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 SMIM10L1P0DMW3 83 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 PTX3P26022 381 aaPredicted RBP7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 RBMS1P29558 406 aaKnown RBP7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 HMOX2P30519 316 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 KRT6CP48668 564 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 RPL14P50914 215 aaKnown RBP7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 ARSFP54793 590 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 GABREP78334 506 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 OCRLQ01968 901 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 ZNF33BQ06732 778 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 RGS1Q08116 209 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 DDX39BQ13838 428 aaKnown RBP7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 ABRAXAS2Q15018 415 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 TCHHL1Q5QJ38 904 aaPredicted RBP7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 SH2D4BQ5SQS7 431 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 DEPDC1Q5TB30 811 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 TMEM164Q5U3C3 297 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 YOD1Q5VVQ6 348 aaPredicted RBP7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 GARNL3Q5VVW2 1013 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 FAM219BQ5XKK7 198 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 KANK2Q63ZY3 851 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 CLEC6AQ6EIG7 209 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 TMEM214Q6NUQ4 689 aaKnown RBP7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 IGF2-ASQ6U949 168 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 RGS9BPQ6ZS82 235 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 CHSY3Q70JA7 882 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 TMEM126BQ8IUX1 230 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 RNF175Q8N4F7 328 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 ZNF781Q8N8C0 355 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 TTC29Q8NA56 475 aaPredicted RBP7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 SLC38A9Q8NBW4 561 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 KCT2Q8NC54 265 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 LRRC8CQ8TDW0 803 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 CCT6BQ92526 530 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 CMTM7Q96FZ5 175 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 SMIM10Q96HG1 83 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 MAGEB18Q96M61 343 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 F2RL3Q96RI0 385 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 NDC1Q9BTX1 674 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 SPRY4Q9C004 299 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 AICDAQ9GZX7 198 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 KLHL31Q9H511 634 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 DMRT3Q9NQL9 472 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 CUTCQ9NTM9 273 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 HAO1Q9UJM8 370 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 PPT2Q9UMR5 302 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 MSRB2Q9Y3D2 182 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 RAP2CQ9Y3L5 183 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 NEUROG3Q9Y4Z2 214 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 PCDHGA7Q9Y5G6 932 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 DNAJC15Q9Y5T4 150 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 SLC22A7Q9Y694 548 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 AK5Q9Y6K8 562 aa7.18□□□□□ -1.26
AC004540.1-206ENST00000448056 WDFY3Q8IZQ1 3526 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms