RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 TTC7AQ9ULT0 858 aaPredicted RBP6.63□□□□□ -1.35
LRRC28-203ENST00000447360 OR2W5A6NFC9 320 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 MAGEB17A8MXT2 336 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 INAFM1C9JVW0 142 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 NPIPA2E9PIF3 369 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 NPIPA3F8WFD2 350 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 FCHO1O14526 889 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 STK10O94804 968 aaKnown RBP6.62□□□□□ -1.35
LRRC28-203ENST00000447360 CCNDBP1O95273 360 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 ERGP11308 486 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 EPXP11678 715 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 CD53P19397 219 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 UQCRC1P31930 480 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 PPARGP37231 505 aaPredicted RBP6.62□□□□□ -1.35
LRRC28-203ENST00000447360 BCL6P41182 706 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 CETN2P41208 172 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 RHAGQ02094 409 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 PRDX1Q06830 199 aaKnown RBP6.62□□□□□ -1.35
LRRC28-203ENST00000447360 SNTB1Q13884 538 aaKnown RBP6.62□□□□□ -1.35
LRRC28-203ENST00000447360 SPARCL1Q14515 664 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 POU6F1Q14863 301 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 TMED2Q15363 201 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 CCSMST1Q4G0I0 132 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 MEI1Q5TIA1 1274 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 FBXW10Q5XX13 1052 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 KCTD11Q693B1 232 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 ZNF425Q6IV72 752 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 ZNF585AQ6P3V2 769 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 PRSS57Q6UWY2 283 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 ZNF662Q6ZS27 426 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 RGS9BPQ6ZS82 235 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 WDR53Q7Z5U6 358 aaPredicted RBP6.62□□□□□ -1.35
LRRC28-203ENST00000447360 CDKL3Q8IVW4 592 aaPredicted RBP6.62□□□□□ -1.35
LRRC28-203ENST00000447360 LRRC8AQ8IWT6 810 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 UBL4BQ8N7F7 174 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 OR5M9Q8NGP3 310 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 SMPDL3AQ92484 453 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 FOPNLQ96NB1 174 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 OR1F2PQ96R84 312 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 BDH2Q9BUT1 245 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 ZDHHC11Q9H8X9 412 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 FOXD3Q9UJU5 478 aaPredicted RBP6.62□□□□□ -1.35
LRRC28-203ENST00000447360 GUCA1BQ9UMX6 200 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 FAM215AQ9Y5M1 114 aa6.62□□□□□ -1.35
LRRC28-203ENST00000447360 ANK3Q12955 4377 aaKnown RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 SCN2AQ99250 2005 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 KCNE1BA0A087WTH5 132 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 A0A1B0GVC2 190 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 CCDC162PA2VCL2 907 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 OR51F1A6NGY5 319 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 IQCF5A8MTL0 148 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 ARHGEF33A8MVX0 844 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 H7C1Q1 480 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 ACOT7O00154 380 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 KPNA5O15131 536 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 P2RX6O15547 441 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 KIF5CO60282 957 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 WDR1O75083 606 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 TUBB4AP04350 444 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 TPH1P17752 444 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 RPA3P35244 121 aaPredicted RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 HSD17B2P37059 387 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 ADH7P40394 386 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 SCTRP47872 440 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 OR4D2P58180 307 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 SNRPNP63162 240 aaKnown RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 ABATP80404 500 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 CCZ1BP86790 482 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 CCZ1P86791 482 aaPredicted RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 MEF2AQ02078 507 aaPredicted RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 ARHGAP19Q14CB8 494 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 SIX1Q15475 284 aaPredicted RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 OASLQ15646 514 aaKnown RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 PARP6Q2NL67 630 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 FBXL19-AS1Q494R0 122 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 CATSPEREQ5SY80 951 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 RIPPLY2Q5TAB7 128 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 RTL6Q6ICC9 239 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 KIAA0408Q6ZU52 694 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 PRSS41Q7RTY9 318 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 MDGA2Q7Z553 956 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 CXorf67Q86X51 503 aaPredicted RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 SLC13A5Q86YT5 568 aaPredicted RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 P3H2Q8IVL5 708 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 LRRC75A-AS1Q8N1F1 130 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 CYP4Z2PQ8N1L4 340 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 CIARTQ8N365 385 aaPredicted RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 TXLNBQ8N3L3 684 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 KIF2BQ8N4N8 673 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 FAM71DQ8N9W8 422 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 OR9A1PQ8NGU1 263 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 SKA2Q8WVK7 121 aaPredicted RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 RNASE6Q93091 150 aaKnown RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 SECISBP2Q96T21 854 aaKnown RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 EBNA1BP2Q99848 306 aaKnown RBP6.61□□□□□ -1.35
LRRC28-203ENST00000447360 DEFB127Q9H1M4 99 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 TIMMDC1Q9NPL8 285 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 HCN3Q9P1Z3 774 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 PCYOX1Q9UHG3 505 aa6.61□□□□□ -1.35
LRRC28-203ENST00000447360 TMA7Q9Y2S6 64 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms