RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 SPNS2Q8IVW8 549 aa22.84■■□□□ 1.25
PMS1-214ENST00000446877 CD200R1Q8TD46 325 aa22.84■■□□□ 1.25
PMS1-214ENST00000446877 MAIP1Q8WWC4 291 aa22.84■■□□□ 1.25
PMS1-214ENST00000446877 ZNF669Q96BR6 464 aaPredicted RBP22.84■■□□□ 1.25
PMS1-214ENST00000446877 ATG10Q9H0Y0 220 aa22.84■■□□□ 1.25
PMS1-214ENST00000446877 SH2B3Q9UQQ2 575 aa22.84■■□□□ 1.25
PMS1-214ENST00000446877 SPG11Q96JI7 2443 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 FAM237BA0A1B0GVD1 139 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 NDUFS4O43181 175 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 CHST10O43529 356 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 CDC40O60508 579 aaKnown RBP eCLIP22.83■■□□□ 1.25
PMS1-214ENST00000446877 F7P08709 466 aaPredicted RBP22.83■■□□□ 1.25
PMS1-214ENST00000446877 CHRNB4P30926 498 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 MEOX1P50221 254 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 DEFB134Q4QY38 66 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 LRRC8EQ6NSJ5 796 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 AFAP1L2Q8N4X5 818 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 TBC1D19Q8N5T2 526 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 DEFB126Q9BYW3 111 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 KCNJ16Q9NPI9 418 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 GUCA1BQ9UMX6 200 aa22.83■■□□□ 1.25
PMS1-214ENST00000446877 SDR42E2A6NKP2 422 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 OR1F1O43749 312 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 GALR3O60755 368 aaPredicted RBP22.82■■□□□ 1.24
PMS1-214ENST00000446877 DIAPH2O60879 1101 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 SERPIND1P05546 499 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 ALOX12P18054 663 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 RGS4P49798 205 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 CCR8P51685 355 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 ART1P52961 327 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 PWP1Q13610 501 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 ZNF227Q86WZ6 799 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 SULF2Q8IWU5 870 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 ZNF740Q8NDX6 193 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 LILRB4Q8NHJ6 448 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 HAUS8Q9BT25 410 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 PARVBQ9HBI1 364 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 TRMT6Q9UJA5 497 aaKnown RBP22.82■■□□□ 1.24
PMS1-214ENST00000446877 PDE10AQ9Y233 779 aa22.82■■□□□ 1.24
PMS1-214ENST00000446877 HS6ST1O60243 411 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 C8GP07360 202 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 HIST1H2AGP0C0S8 130 aaPredicted RBP22.81■■□□□ 1.24
PMS1-214ENST00000446877 HIST1H2ADP20671 130 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 RFC3P40938 356 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 OLR1P78380 273 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 TRIP13Q15645 432 aaPredicted RBP22.81■■□□□ 1.24
PMS1-214ENST00000446877 UGT3A1Q6NUS8 523 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 LCTLQ6UWM7 567 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 TMEM139Q8IV31 216 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 LMNTD2Q8IXW0 634 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 CALML6Q8TD86 181 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 RND1Q92730 232 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 HIST1H2AHQ96KK5 128 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 HIST1H2AJQ99878 128 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 ZNF559Q9BR84 538 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 H2AFJQ9BTM1 129 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 SGPP1Q9BX95 441 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 TP63Q9H3D4 680 aaPredicted RBP22.81■■□□□ 1.24
PMS1-214ENST00000446877 HOMER3Q9NSC5 361 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 C20orf96Q9NUD7 363 aaPredicted RBP22.81■■□□□ 1.24
PMS1-214ENST00000446877 GTF3C1Q12789 2109 aa22.81■■□□□ 1.24
PMS1-214ENST00000446877 SAGE2PA6NJ88 616 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 FAM90A27PA6NNH2 459 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 PSMD12O00232 456 aaPredicted RBP22.8■■□□□ 1.24
PMS1-214ENST00000446877 PEX1O43933 1283 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 CEP104O60308 925 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 FGGP02679 453 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 NPPBP16860 134 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 IGFBP2P18065 325 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 TFEBP19484 476 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 SLC1A2P43004 574 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 VPS41P49754 854 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 RGS1Q08116 209 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 GPS1Q13098 491 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 ARHGAP11AQ6P4F7 1023 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 MBOAT1Q6ZNC8 495 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 ABHD13Q7L211 337 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 TMEM200AQ86VY9 491 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 ARMC2Q8NEN0 867 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 ADAMTS6Q9UKP5 1117 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 RNF6Q9Y252 685 aa22.8■■□□□ 1.24
PMS1-214ENST00000446877 NKX2-6A6NCS4 301 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 PABPN1LA6NDY0 278 aaKnown RBP22.79■■□□□ 1.24
PMS1-214ENST00000446877 DNAJB6O75190 326 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 NADKO95544 446 aaPredicted RBP22.79■■□□□ 1.24
PMS1-214ENST00000446877 BTG2P78543 158 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 SP140Q13342 867 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 KCTD19Q17RG1 926 aaPredicted RBP22.79■■□□□ 1.24
PMS1-214ENST00000446877 CMPK2Q5EBM0 449 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 CES4AQ5XG92 561 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 QSOX2Q6ZRP7 698 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 CAND1Q86VP6 1230 aaKnown RBP22.79■■□□□ 1.24
PMS1-214ENST00000446877 MYO1HQ8N1T3 1032 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 MARVELD2Q8N4S9 558 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 TMEM156Q8N614 296 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 ABHD11Q8NFV4 315 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 C16orf52Q8NHV5 167 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 EEF1AKMT1Q8WVE0 214 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 AARSD1Q9BTE6 412 aaKnown RBP22.79■■□□□ 1.24
PMS1-214ENST00000446877 UCK2Q9BZX2 261 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms