RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PDYNP01213 254 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 HLA-DQA2P01906 255 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 FGF3P11487 239 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 DGKQP52824 942 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 DCTN2Q13561 401 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 SMAD2Q15796 467 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 C5orf22Q49AR2 442 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 NOXRED1Q6NXP6 359 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 CHCHD4Q8N4Q1 142 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 TMEM125Q96AQ2 219 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 RHBDF1Q96CC6 855 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 VPS35Q96QK1 796 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 EPB41L4BQ9H329 900 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 ACTL8Q9H568 366 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 ANKMY1Q9P2S6 941 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 PPIEQ9UNP9 301 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 SLC9B1P1A6NJY1 282 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 IFNW1P05000 195 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 FHP07954 510 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 NET1Q7Z628 596 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 TMEM150AQ86TG1 271 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 CNTN4Q8IWV2 1026 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 ULK2Q8IYT8 1036 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 OR5AK3PQ8NH89 298 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 HUS1BQ8NHY5 278 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 PHF21AQ96BD5 680 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 BIRC7Q96CA5 298 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 ALG2Q9H553 416 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 MBNL1Q9NR56 388 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 FAM120CQ9NX05 1096 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 TIA1P31483 386 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 MSX2P35548 267 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 PLGLB1Q02325 96 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 BHLHA9Q7RTU4 235 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 SETD9Q8NE22 299 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 OR52B6Q8NGF0 335 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 OR56A1Q8NGH5 318 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 MPP4Q96JB8 637 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 TMEM74Q96NL1 305 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 TAPBPLQ9BX59 468 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 LYVE1Q9Y5Y7 322 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 TCF3P15923 654 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 XKP51811 444 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 DECR1Q16698 335 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 LCTLQ6UWM7 567 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 VN1R5Q7Z5H4 357 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 RANBP3LQ86VV4 465 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 RBM15BQ8NDT2 890 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 DAZLQ92904 295 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 SLC47A1Q96FL8 570 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 PELOQ9BRX2 385 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 DEFB126Q9BYW3 111 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 EPB41L1Q9H4G0 881 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 TRPV4Q9HBA0 871 aa13.56□□□□□ -0.24
SMARCA4-204ENST00000444061 PRORSD1PA6NEY8 169 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 H7C0S8 307 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 SCELO95171 688 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 PSMG1O95456 288 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 VNN2O95498 520 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 OR4D2P58180 307 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 C6orf136Q5SQH8 315 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 IYDQ6PHW0 289 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 GALNT7Q86SF2 657 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 ARMC8Q8IUR7 673 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 KLHDC8AQ8IYD2 350 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 REEP4Q9H6H4 257 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 RDH14Q9HBH5 336 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 PRSS51A0A1B0GVH4 220 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 CLIC1O00299 241 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 GABRG2P18507 467 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 CD247P20963 164 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 C18orf21Q32NC0 220 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 LUZP2Q86TE4 346 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 ZNF527Q8NB42 609 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 ADAMTS18Q8TE60 1221 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 MUC13Q9H3R2 512 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 FGF22Q9HCT0 170 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 IGSF5Q9NSI5 407 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 SRPK3Q9UPE1 567 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 A6NCN8 305 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 GRXCR2A6NFK2 248 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 RTCAO00442 366 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 IDH2P48735 452 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 CCT3P49368 545 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 CASP9P55211 416 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 MTPNP58546 118 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 TUBB3Q13509 450 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 AGBL5Q8NDL9 886 aa13.55□□□□□ -0.24
SMARCA4-204ENST00000444061 ALPPP05187 535 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 BNC1Q01954 994 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 PCBP2Q15366 365 aaKnown RBP eCLIP13.54□□□□□ -0.248e-6■■□□□ 13.7
SMARCA4-204ENST00000444061 EIPR1Q53HC9 387 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 B3GNT6Q6ZMB0 384 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 DPP10Q8N608 796 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 OR1E3Q8WZA6 343 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 PTERQ96BW5 349 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 PRR11Q96HE9 360 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 GIMAP2Q9UG22 337 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 A0A1W2PPC4 97 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms