RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 B3GNTL1Q67FW5 361 aaPredicted RBP17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 TMIGD1Q6UXZ0 262 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 CPEB2Q7Z5Q1 589 aaKnown RBP17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 TBC1D1Q86TI0 1168 aaPredicted RBP17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 CTAGE6Q86UF2 777 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 CTAGE4Q8IX94 777 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 KRT78Q8N1N4 520 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 DNAJB14Q8TBM8 379 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 CREB3L4Q8TEY5 395 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 TBC1D20Q96BZ9 403 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 WDR34Q96EX3 536 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 SMIM10Q96HG1 83 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 TMEM79Q9BSE2 394 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 CD274Q9NZQ7 290 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 LUZP4Q9P127 313 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 DMGDHQ9UI17 866 aaKnown RBP17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 RNF112Q9ULX5 631 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 ACOT9Q9Y305 439 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 PCDHGA10Q9Y5H3 936 aa17.77■□□□□ 0.44
ATPAF2-201ENST00000444058 MAGEB17A8MXT2 336 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 FHP07954 510 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 LTA4HP09960 611 aaKnown RBP17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 ZNF888P0CJ79 500 aaPredicted RBP17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 JAK1P23458 1154 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 HPDP32754 393 aaPredicted RBP17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 STXBP1P61764 594 aaKnown RBP17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 MFSD4BQ5TF39 518 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 CMC1Q7Z7K0 106 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 CUZD1Q86UP6 607 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 NOA1Q8NC60 698 aaKnown RBP17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 SNRNP40Q96DI7 357 aaKnown RBP17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 PEX11GQ96HA9 241 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 BARD1Q99728 777 aaKnown RBP17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 SLC29A3Q9BZD2 475 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 ACSS3Q9H6R3 686 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 LANCL2Q9NS86 450 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 NUDT4Q9NZJ9 180 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 RELNP78509 3460 aa17.76■□□□□ 0.43
ATPAF2-201ENST00000444058 A0A087X1B8 175 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 CLGNO14967 610 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 CHST10O43529 356 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 KERAO60938 352 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 CLEC3AO75596 197 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 WFS1O76024 890 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 S100BP04271 92 aaPredicted RBP17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 TFEBP19484 476 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 TSFMP43897 325 aaKnown RBP17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 KCNC1P48547 511 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 RHAGQ02094 409 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 UBAP2LQ14157 1087 aaKnown RBP17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 E2F2Q14209 437 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 SLBPQ14493 270 aaKnown RBP eCLIP17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 EFTUD2Q15029 972 aaKnown RBP eCLIP17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 PDK4Q16654 411 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 PLAG1Q6DJT9 500 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 LRRC70Q7Z2Q7 622 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 ANKRD37Q7Z713 158 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 FAM26EQ8N5C1 309 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 OR5T3Q8NGG3 340 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 KIF18AQ8NI77 898 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 RHEBL1Q8TAI7 183 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 BRIX1Q8TDN6 353 aaKnown RBP17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 ATOH8Q96SQ7 321 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 EFCAB11Q9BUY7 163 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 CD244Q9BZW8 370 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 RNF32Q9H0A6 362 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 ALG9Q9H6U8 611 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 IGSF5Q9NSI5 407 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 NINJ2Q9NZG7 142 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 CNTRLQ7Z7A1 2325 aa17.75■□□□□ 0.43
ATPAF2-201ENST00000444058 LRRK2Q5S007 2527 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 HMX2A2RU54 273 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 ZNF860A6NHJ4 632 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 HSPA7P48741 367 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 PCDH1Q08174 1060 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 DLG1Q12959 904 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 LAPTM5Q13571 262 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 ZNF169Q14929 603 aaPredicted RBP17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 NSDHLQ15738 373 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 TBCCQ15814 346 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 EXT1Q16394 746 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 FAM83EQ2M2I3 478 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 PRR30Q53SZ7 412 aaPredicted RBP17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 LINC00696Q6ZRV3 163 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 SHISA5Q8N114 240 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 HAS2Q92819 552 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 GAL3ST3Q96A11 431 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 PTCD3Q96EY7 689 aaKnown RBP17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 FMO2Q99518 471 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 TEKT2Q9UIF3 430 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 CSAG2Q9Y5P2 127 aa17.74■□□□□ 0.43
ATPAF2-201ENST00000444058 SETXQ7Z333 2677 aaKnown RBP17.73■□□□□ 0.43
ATPAF2-201ENST00000444058 DYTNA2CJ06 578 aa17.73■□□□□ 0.43
ATPAF2-201ENST00000444058 LRIT2A6NDA9 550 aa17.73■□□□□ 0.43
ATPAF2-201ENST00000444058 SYCE1LA8MT33 242 aa17.73■□□□□ 0.43
ATPAF2-201ENST00000444058 TCP11X1B4DZS4 312 aa17.73■□□□□ 0.43
ATPAF2-201ENST00000444058 C2P06681 752 aa17.73■□□□□ 0.43
ATPAF2-201ENST00000444058 CASP2P42575 452 aa17.73■□□□□ 0.43
ATPAF2-201ENST00000444058 RAB8AP61006 207 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms