RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TAF8Q7Z7C8 310 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 MRGPRGQ86SM5 289 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 ADGRG6Q86SQ4 1221 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 CROCCP2Q86T23 111 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 TRIM74Q86UV6 250 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 RAVER1Q8IY67 606 aaKnown RBP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 CARFQ8N187 725 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 KRT222Q8N1A0 295 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 SPATA6LQ8N4H0 392 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 FAM169BQ8N8A8 192 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 GPATCH11Q8N954 259 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 RASGEF1AQ8N9B8 481 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 BANPQ8N9N5 519 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 DDHD1Q8NEL9 900 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 DENND1AQ8TEH3 1009 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 ANKRD49Q8WVL7 239 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 TSACCQ96A04 125 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 FAM136AQ96C01 138 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 MTBPQ96DY7 904 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 TSPAN17Q96FV3 270 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 ELMO2Q96JJ3 720 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 SMAD5Q99717 465 aaKnown RBP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 CTRCQ99895 268 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 SPATA16Q9BXB7 569 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 ULBP3Q9BZM4 244 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 VPS11Q9H270 941 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 DPEP2Q9H4A9 486 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 SNX15Q9NRS6 342 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 INTS10Q9NVR2 710 aaKnown RBP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 MKS1Q9NXB0 559 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 NSMCE4AQ9NXX6 385 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 TXNDC16Q9P2K2 825 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 SLC17A7Q9P2U7 560 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 CRLS1Q9UJA2 301 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 IKZF3Q9UKT9 509 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 EMCNQ9ULC0 261 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 SLC39A10Q9ULF5 831 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 PNMA8BQ9ULN7 279 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 PCYT1BQ9Y5K3 369 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 IKBKGQ9Y6K9 419 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 CUBNO60494 3623 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 A0A096LPK6 155 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 UBA6A0AVT1 1052 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 TMEM120BA0PK00 339 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 B4DGG1 531 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 H3BMM5 538 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 PRMT5O14744 637 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 POLR3GO15318 223 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 PRPF4O43172 522 aaKnown RBP eCLIP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 TM7SF2O76062 418 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 TSPAN12O95859 305 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 FUCA1P04066 466 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ALPPP05187 535 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 SBK3P0C264 359 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 PKMP14618 531 aaKnown RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ATF4P18848 351 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 AGAP20933 346 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 SAT1P21673 171 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 TEAD1P28347 426 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 TYK2P29597 1187 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ATP5DP30049 168 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 RPA3P35244 121 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ETV4P43268 484 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 GPR1P46091 355 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 TTPAP49638 278 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 SERPINB8P50452 374 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 CTSCP53634 463 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 RRADP55042 308 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ADARP55265 1226 aaKnown RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 SRP54P61011 504 aaKnown RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 FOLH1Q04609 750 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 CHAF1BQ13112 559 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 GPS2Q13227 327 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ITGA9Q13797 1035 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 USP10Q14694 798 aaKnown RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 TCEA2Q15560 299 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ALG11Q2TAA5 492 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 GPR33Q49SQ1 333 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ZNF658BQ4V348 819 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 HSP90B2PQ58FF3 399 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 AARS2Q5JTZ9 985 aaKnown RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 RNF187Q5TA31 235 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 LGSNQ5TDP6 509 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 RAET1GQ6H3X3 334 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 FAM45BPQ6NSW5 357 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 PNCKQ6P2M8 343 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 POMZP3Q6PJE2 187 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 NAPRTQ6XQN6 538 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ZNF517Q6ZMY9 492 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 DET1Q7L5Y6 550 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 SDCCAG8Q86SQ7 713 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 SYVN1Q86TM6 617 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 CENPLQ8N0S6 344 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 CLDN19Q8N6F1 224 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ANKRD42Q8N9B4 389 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 SIDT2Q8NBJ9 832 aaKnown RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 FAM45AQ8TCE6 357 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 CD200R1Q8TD46 325 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 TCP10LQ8TDR4 215 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ACMSDQ8TDX5 336 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms