RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CYTH2Q99418 400 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 SARGQ9BW04 601 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 PLA2G3Q9NZ20 509 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 FAM159BA6NKW6 160 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 A8MUI8 341 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 PSMD12O00232 456 aaPredicted RBP18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 GALR3O60755 368 aaPredicted RBP18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 F10P00742 488 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 ITGAMP11215 1152 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 SPRP35270 261 aaPredicted RBP18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 SOX11P35716 441 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 ATP6V0D1P61421 351 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 CBLBQ13191 982 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 NSDHLQ15738 373 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 ANKRD37Q7Z713 158 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 GPSM1Q86YR5 675 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 SNX31Q8N9S9 440 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 SSC4DQ8WTU2 575 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 TBC1D20Q96BZ9 403 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 C16orf45Q96MC5 204 aaPredicted RBP18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 GPR22Q99680 433 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 PHACTR1Q9C0D0 580 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 CD274Q9NZQ7 290 aa18.73■□□□□ 0.59
SHROOM1-204ENST00000440118 TRAV17A0A0B4J275 112 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 OR2W5A6NFC9 320 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 FHP07954 510 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 GDF5P43026 501 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 MAGEA4P43358 317 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 EFNA3P52797 238 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 RAB8AP61006 207 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 RAB10P61026 200 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 TGFBIQ15582 683 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 C18orf21Q32NC0 220 aaPredicted RBP18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 KBTBD12Q3ZCT8 623 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 TOR1AIP1Q5JTV8 583 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 KRT78Q8N1N4 520 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 AFAP1L2Q8N4X5 818 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 CATSPER1Q8NEC5 780 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 GRHL3Q8TE85 626 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 RHBDF1Q96CC6 855 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 FAR2Q96K12 515 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 LPAR4Q99677 370 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 MCMBPQ9BTE3 642 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 ABI3Q9P2A4 366 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 RNF112Q9ULX5 631 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 NTNG1Q9Y2I2 539 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 ICE1Q9Y2F5 2266 aa18.72■□□□□ 0.59
SHROOM1-204ENST00000440118 ZGRF1Q86YA3 2104 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 CLGNO14967 610 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 CHST10O43529 356 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 B4GALT2O60909 372 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 SEMA7AO75326 666 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 MYBL2P10244 700 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 STXBP1P61764 594 aaKnown RBP18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 SLBPQ14493 270 aaKnown RBP eCLIP18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 EXT1Q16394 746 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 SFT2D3Q587I9 215 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 GRTP1Q5TC63 336 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 PLAG1Q6DJT9 500 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 PAPD4Q6PIY7 484 aaKnown RBP18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 TBC1D1Q86TI0 1168 aaPredicted RBP18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 ANKRD53Q8N9V6 530 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 TTLQ8NG68 377 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 UTP15Q8TED0 518 aaKnown RBP18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 PSMF1Q92530 271 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 TSLPQ969D9 159 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 IMMP1LQ96LU5 166 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 CAPS2Q9BXY5 557 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 RHBGQ9H310 441 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 KCNK13Q9HB14 408 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 DNAJC11Q9NVH1 559 aa18.71■□□□□ 0.59
SHROOM1-204ENST00000440118 ESYT3A0FGR9 886 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 MAGEB17A8MXT2 336 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 UTP20O75691 2785 aaKnown RBP18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 URI1O94763 535 aaPredicted RBP18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 CBX6O95503 412 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 B3GALT4O96024 378 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 C1GALT1C1LP0DN25 315 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 GP1BBP13224 206 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 CD1DP15813 335 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 SLC6A12P48065 614 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 TNFSF10P50591 281 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 OR4D2P58180 307 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 TAS2R50P59544 299 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 GPX6P59796 221 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 SLC7A5Q01650 507 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 NAB1Q13506 487 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 SULT1C3Q6IMI6 304 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 TMIGD1Q6UXZ0 262 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 SHISA5Q8N114 240 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 CYP4X1Q8N118 509 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 BCORP1Q8N888 145 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 FBF1Q8TES7 1133 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 ZNF592Q92610 1267 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 SLC6A16Q9GZN6 736 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 OLAHQ9NV23 265 aa18.7■□□□□ 0.58
SHROOM1-204ENST00000440118 A0A088AWK7 358 aa18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 WDPCPO95876 746 aa18.69■□□□□ 0.58
SHROOM1-204ENST00000440118 SERPINA6P08185 405 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms