RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 TEX35Q5T0J7 233 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 FAAH2Q6GMR7 532 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 KLC3Q6P597 504 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 KRT78Q8N1N4 520 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 TEX19Q8NA77 164 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 UTP15Q8TED0 518 aaKnown RBP22.36■■□□□ 1.17
VARS-217ENST00000440048 WDR34Q96EX3 536 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 SMAD5Q99717 465 aaKnown RBP22.36■■□□□ 1.17
VARS-217ENST00000440048 KLHL31Q9H511 634 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 NT5DC2Q9H857 520 aa22.36■■□□□ 1.17
VARS-217ENST00000440048 PRRC2CQ9Y520 2896 aaKnown RBP22.36■■□□□ 1.17
VARS-217ENST00000440048 TRIM49D1C9J1S8 452 aa22.35■■□□□ 1.17
VARS-217ENST00000440048 SERPINA6P08185 405 aa22.35■■□□□ 1.17
VARS-217ENST00000440048 XCR1P46094 333 aa22.35■■□□□ 1.17
VARS-217ENST00000440048 DOC2AQ14183 400 aa22.35■■□□□ 1.17
VARS-217ENST00000440048 TOR1AIP1Q5JTV8 583 aa22.35■■□□□ 1.17
VARS-217ENST00000440048 ABHD13Q7L211 337 aa22.35■■□□□ 1.17
VARS-217ENST00000440048 TTLQ8NG68 377 aa22.35■■□□□ 1.17
VARS-217ENST00000440048 OR5T3Q8NGG3 340 aa22.35■■□□□ 1.17
VARS-217ENST00000440048 PTCD3Q96EY7 689 aaKnown RBP22.35■■□□□ 1.17
VARS-217ENST00000440048 PITHD1Q9GZP4 211 aaPredicted RBP22.35■■□□□ 1.17
VARS-217ENST00000440048 AICDAQ9GZX7 198 aa22.35■■□□□ 1.17
VARS-217ENST00000440048 ZNF358Q9NW07 568 aa22.35■■□□□ 1.17
VARS-217ENST00000440048 FLNCQ14315 2725 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 URADA6NGE7 173 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 K7EPI3 171 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 HPP00738 406 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 SMIM10L1P0DMW3 83 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 MYBL2P10244 700 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 CD22P20273 847 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 ITGA3P26006 1051 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 GCAP28676 217 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 CASRP41180 1078 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 RAB8AP61006 207 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 KCNC4Q03721 635 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 TECRLQ5HYJ1 363 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 VWA5B1Q5TIE3 1220 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 PARP9Q8IXQ6 854 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 EIF1ADQ8N9N8 165 aaKnown RBP22.34■■□□□ 1.17
VARS-217ENST00000440048 SMIM10Q96HG1 83 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 VN1R1Q9GZP7 353 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 ZNF552Q9H707 407 aaPredicted RBP22.34■■□□□ 1.17
VARS-217ENST00000440048 OPTCQ9UBM4 332 aa22.34■■□□□ 1.17
VARS-217ENST00000440048 ZNF490Q9ULM2 529 aaPredicted RBP22.34■■□□□ 1.17
VARS-217ENST00000440048 A0A1W2PQ72 361 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 PCDH17O14917 1159 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 DNAJB6O75190 326 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 WISP1O95388 367 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 SNRPAP09012 282 aaKnown RBP22.33■■□□□ 1.17
VARS-217ENST00000440048 COX6A1P12074 109 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 GFAPP14136 432 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 GSTM2P28161 218 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 SKP1P63208 163 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 IRF8Q02556 426 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 EEF1A2Q05639 463 aaKnown RBP22.33■■□□□ 1.17
VARS-217ENST00000440048 Q0VFX4 171 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 CHIT1Q13231 466 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 SETDB1Q15047 1291 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 TBCCQ15814 346 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 PFKFB4Q16877 469 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 MINDY4Q4G0A6 757 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 MFSD4BQ5TF39 518 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 NIPAL1Q6NVV3 410 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 TMEM205Q6UW68 189 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 PEX11GQ96HA9 241 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 SEC16BQ96JE7 1060 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 EFCAB11Q9BUY7 163 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 EPN3Q9H201 632 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 EPB41L4BQ9H329 900 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 ZNF160Q9HCG1 818 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 C5AR2Q9P296 337 aa22.33■■□□□ 1.17
VARS-217ENST00000440048 LOC102723996A0A087X1L8 192 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 OR2W5A6NFC9 320 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 C4orf51C9J302 202 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 CHST10O43529 356 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 KLK8O60259 260 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 KLHL41O60662 606 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 CASP2P42575 452 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 ALDH18A1P54886 795 aaKnown RBP22.32■■□□□ 1.16
VARS-217ENST00000440048 STXBP1P61764 594 aaKnown RBP22.32■■□□□ 1.16
VARS-217ENST00000440048 OLR1P78380 273 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 LAPTM5Q13571 262 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 E2F2Q14209 437 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 SLC29A2Q14542 456 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 ADGRD1Q6QNK2 874 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 NDUFAF7Q7L592 441 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 VN1R5Q7Z5H4 357 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 CCT6BQ92526 530 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 TRIM4Q9C037 500 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 CLMPQ9H6B4 373 aa22.32■■□□□ 1.16
VARS-217ENST00000440048 CPSF2Q9P2I0 782 aaKnown RBP22.32■■□□□ 1.16
VARS-217ENST00000440048 CNTRLQ7Z7A1 2325 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 IGHV1-45A0A0A0MS14 117 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 NSG1A0A0A6YYJ2 146 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 ANKDD1BA6NHY2 528 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 PYCARD-AS1I3L0S3 204 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 DPM1O60762 260 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 CLEC3AO75596 197 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 WFS1O76024 890 aa22.31■■□□□ 1.16
VARS-217ENST00000440048 ALPPP05187 535 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms