RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 CCM2Q9BSQ5 444 aa1.85□□□□□ -2.11
CDC40-204ENST00000431461 UTP14AQ9BVJ6 771 aaKnown RBP1.85□□□□□ -2.11
CDC40-204ENST00000431461 IDI2Q9BXS1 227 aa1.85□□□□□ -2.11
CDC40-204ENST00000431461 LRRC2Q9BYS8 371 aa1.85□□□□□ -2.11
CDC40-204ENST00000431461 ST6GALNAC4Q9H4F1 302 aa1.85□□□□□ -2.11
CDC40-204ENST00000431461 ATP13A3Q9H7F0 1226 aa1.85□□□□□ -2.11
CDC40-204ENST00000431461 SP140LQ9H930 580 aa1.85□□□□□ -2.11
CDC40-204ENST00000431461 HACD3Q9P035 362 aa1.85□□□□□ -2.11
CDC40-204ENST00000431461 POLKQ9UBT6 870 aa1.85□□□□□ -2.11
CDC40-204ENST00000431461 GPR132Q9UNW8 380 aa1.85□□□□□ -2.11
CDC40-204ENST00000431461 MRPS28Q9Y2Q9 187 aaKnown RBP1.85□□□□□ -2.11
CDC40-204ENST00000431461 CSNK1G3Q9Y6M4 447 aa1.85□□□□□ -2.11
CDC40-204ENST00000431461 A0A0J9YWU9 116 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 MPTX1A8MV57 137 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 M0R296 226 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 ZNF263O14978 683 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 MAGEC1O60732 1142 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 LETM1O95202 739 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 FGF19O95750 216 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 PDGFBP01127 241 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 CD48P09326 243 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 SP9P0CG40 484 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 EEF2P13639 858 aaKnown RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 F3P13726 295 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 ANPEPP15144 967 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 DPEP1P16444 411 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 ITIH1P19827 911 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 C4BPBP20851 252 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 PRKACGP22612 351 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 CCND3P30281 292 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 SSTR1P30872 391 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 MMP12P39900 470 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 TNNT3P45378 269 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 CRKLP46109 303 aaKnown RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 GMPSP49915 693 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 KHKP50053 298 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 CRYBA2P53672 197 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 ABCE1P61221 599 aaKnown RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 CDKL1Q00532 357 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 ELAVL2Q12926 359 aaKnown RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 SQLEQ14534 574 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 SMU1Q2TAY7 513 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 MS4A18Q3C1V0 323 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 C2orf76Q3KRA6 126 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 RFTN2Q52LD8 501 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 FASTKD1Q53R41 847 aaKnown RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 SLC25A53Q5H9E4 307 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 GLRA4Q5JXX5 417 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 AGAP6Q5VW22 663 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 ALKBH5Q6P6C2 394 aaKnown RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 CD164L2Q6UWJ8 174 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 TMEM182Q6ZP80 229 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 RFPL4BQ6ZWI9 263 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 ANKRD33Q7Z3H0 272 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 ZFAND4Q86XD8 727 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 CREBRFQ8IUR6 639 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 KLHDC8AQ8IYD2 350 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 TEX26Q8N6G2 289 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 AMER3Q8N944 861 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 KBTBD8Q8NFY9 601 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 OR5M9Q8NGP3 310 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 SPPL2AQ8TCT8 520 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 LRRC15Q8TF66 581 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 AZIN2Q96A70 460 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 ULK4Q96C45 1275 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 MOCOSQ96EN8 888 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 CDKN2AIPNLQ96HQ2 116 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 ZNF300Q96RE9 604 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 SPAG8Q99932 426 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 ATF6BQ99941 703 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 ALKBH7Q9BT30 221 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 UBXN6Q9BZV1 441 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 TRIM15Q9C019 465 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 SHARPINQ9H0F6 387 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 DPEP2Q9H4A9 486 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 SRD5A3Q9H8P0 318 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 AKIRIN1Q9H9L7 192 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 RNPEPL1Q9HAU8 725 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 SLC7A10Q9NS82 523 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 COMMD8Q9NX08 183 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 NLGN3Q9NZ94 848 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 SENP1Q9P0U3 644 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 TRPC4Q9UBN4 977 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 DBF4Q9UBU7 674 aaPredicted RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 UBQLN2Q9UHD9 624 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 NOCTQ9UK39 431 aaKnown RBP1.84□□□□□ -2.11
CDC40-204ENST00000431461 ERVK-19Q9WJR5 959 aa1.84□□□□□ -2.11
CDC40-204ENST00000431461 A0A087WZ39 114 aa1.83□□□□□ -2.12
CDC40-204ENST00000431461 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.83□□□□□ -2.12
CDC40-204ENST00000431461 A0A0U1RQK1 487 aa1.83□□□□□ -2.12
CDC40-204ENST00000431461 ZNF320A2RRD8 509 aa1.83□□□□□ -2.12
CDC40-204ENST00000431461 ASB14A6NK59 587 aa1.83□□□□□ -2.12
CDC40-204ENST00000431461 SNURFLB1AK76 121 aa1.83□□□□□ -2.12
CDC40-204ENST00000431461 FAM86B1E9PN63 330 aa1.83□□□□□ -2.12
CDC40-204ENST00000431461 H7C423 109 aa1.83□□□□□ -2.12
CDC40-204ENST00000431461 K7EQD1 137 aa1.83□□□□□ -2.12
CDC40-204ENST00000431461 CACNB4O00305 520 aaPredicted RBP1.83□□□□□ -2.12
CDC40-204ENST00000431461 INPP4BO15327 924 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms