RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ULBP3Q9BZM4 244 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 ROGDIQ9GZN7 287 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 C20orf27Q9GZN8 174 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 SPRTNQ9H040 489 aaPredicted RBP10.48□□□□□ -0.73
CHD4-202ENST00000430771 SYNPO2LQ9H987 977 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 ANKHQ9HCJ1 492 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 TNFRSF12AQ9NP84 129 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 RIC8BQ9NVN3 520 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 FAM53CQ9NYF3 392 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 AHSPQ9NZD4 102 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 VTI1BQ9UEU0 232 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 MARCOQ9UEW3 520 aaPredicted RBP10.48□□□□□ -0.73
CHD4-202ENST00000430771 SLC12A4Q9UP95 1085 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 NEUROG3Q9Y4Z2 214 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 DNAJC15Q9Y5T4 150 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 SLC22A7Q9Y694 548 aa10.48□□□□□ -0.73
CHD4-202ENST00000430771 LRIT2A6NDA9 550 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 TRPC5OSA6NMA1 111 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 DSCR3O14972 297 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 PIP5K1BO14986 540 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 HDAC3O15379 428 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 ZNF749O43361 778 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 TGFB1P01137 390 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 ZNF888P0CJ79 500 aaPredicted RBP10.47□□□□□ -0.73
CHD4-202ENST00000430771 ALOX12P18054 663 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 SERPINB3P29508 390 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 TSFMP43897 325 aaKnown RBP10.47□□□□□ -0.73
CHD4-202ENST00000430771 GCGRP47871 477 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 AVPR1BP47901 424 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 NEK2P51955 445 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 ABRAXAS2Q15018 415 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 NR6A1Q15406 480 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 TUBB8Q3ZCM7 444 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 SPIN4Q56A73 249 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 PWWP2BQ6NUJ5 590 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 PRMT9Q6P2P2 845 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 PAGE2Q7Z2X7 111 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 MTERF4Q7Z6M4 381 aaKnown RBP10.47□□□□□ -0.73
CHD4-202ENST00000430771 NUDT13Q86X67 352 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 KCT2Q8NC54 265 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 MTFMTQ96DP5 389 aaKnown RBP10.47□□□□□ -0.73
CHD4-202ENST00000430771 MS4A6EQ96DS6 147 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 CLIP3Q96DZ5 547 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 LRFN5Q96NI6 719 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 HBEGFQ99075 208 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 SIKE1Q9BRV8 207 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 ACPTQ9BZG2 426 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 NSRP1Q9H0G5 558 aaKnown RBP10.47□□□□□ -0.73
CHD4-202ENST00000430771 ZNF395Q9H8N7 513 aaPredicted RBP10.47□□□□□ -0.73
CHD4-202ENST00000430771 SLCO1B3Q9NPD5 702 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 THSD1Q9NS62 852 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 FARSBQ9NSD9 589 aaKnown RBP10.47□□□□□ -0.73
CHD4-202ENST00000430771 STARD5Q9NSY2 213 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 NDOR1Q9UHB4 597 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 KLK13Q9UKR3 277 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 CDC14AQ9UNH5 594 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 PCDHGA7Q9Y5G6 932 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 B3GALT1Q9Y5Z6 326 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 DCHS1Q96JQ0 3298 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 SPTBN2O15020 2390 aa10.47□□□□□ -0.73
CHD4-202ENST00000430771 A0A1W2PNU3 283 aaPredicted RBP10.46□□□□□ -0.73
CHD4-202ENST00000430771 PMS2P1A4D2B8 440 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 H0YIG0 161 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 POLR3GO15318 223 aaPredicted RBP10.46□□□□□ -0.73
CHD4-202ENST00000430771 NVLO15381 856 aaKnown RBP10.46□□□□□ -0.73
CHD4-202ENST00000430771 EDF1O60869 148 aaKnown RBP10.46□□□□□ -0.73
CHD4-202ENST00000430771 VPS4BO75351 444 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 DXOO77932 396 aaKnown RBP10.46□□□□□ -0.73
CHD4-202ENST00000430771 STK17BO94768 372 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 KIAA0754O94854 1291 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 TIAF1O95411 115 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 NSA2O95478 260 aaKnown RBP10.46□□□□□ -0.73
CHD4-202ENST00000430771 CTSBP07858 339 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 ADRB1P08588 477 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 VIMP08670 466 aaKnown RBP10.46□□□□□ -0.73
CHD4-202ENST00000430771 TROVE2P10155 538 aaKnown RBP eCLIP10.46□□□□□ -0.73
CHD4-202ENST00000430771 KITP10721 976 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 IL1RNP18510 177 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 PRPH2P23942 346 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 HNRNPH1P31943 449 aaKnown RBP10.46□□□□□ -0.73
CHD4-202ENST00000430771 SSR2P43308 183 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 MTTPP55157 894 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 ACSM2AQ08AH3 577 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 HYAL2Q12891 473 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 MAP7Q14244 749 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 RTP5Q14D33 572 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 ATP6AP1LQ52LC2 224 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 XKR7Q5GH72 579 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 DEPDC1Q5TB30 811 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 ARHGAP40Q5TG30 622 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 ACSM2BQ68CK6 577 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 ATG14Q6ZNE5 492 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 TTLL10Q6ZVT0 673 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 TRIM46Q7Z4K8 759 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 RNF175Q8N4F7 328 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 ADAMTS18Q8TE60 1221 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 UTP15Q8TED0 518 aaKnown RBP10.46□□□□□ -0.73
CHD4-202ENST00000430771 PMEPA1Q969W9 287 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 RGMAQ96B86 450 aa10.46□□□□□ -0.73
CHD4-202ENST00000430771 METTL2AQ96IZ6 378 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms